Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 3
- cytosol 1
- plasma membrane 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY18954 | Canola | plastid | 89.02 | 86.9 |
| Bra004887.1-P | Field mustard | plastid | 85.37 | 84.34 |
| CDX74708 | Canola | plastid | 85.37 | 84.34 |
| AT3G60540.2 | Thale cress | plastid | 82.93 | 83.95 |
| Bra040326.1-P | Field mustard | plastid | 84.15 | 83.13 |
| CDY37026 | Canola | plastid | 84.15 | 83.13 |
| CDY27395 | Canola | mitochondrion, plastid | 79.27 | 81.25 |
| Bra000368.1-P | Field mustard | plastid | 79.27 | 79.27 |
| CDX83408 | Canola | plastid | 79.27 | 79.27 |
| KRH65413 | Soybean | endoplasmic reticulum | 76.83 | 76.83 |
| KRH76131 | Soybean | plastid | 76.83 | 76.83 |
| PGSC0003DMT400018011 | Potato | mitochondrion | 70.73 | 69.05 |
| TraesCS5B01G013400.1 | Wheat | plastid | 63.41 | 65.82 |
| TraesCS5A01G015200.1 | Wheat | plastid | 63.41 | 65.82 |
| EES00928 | Sorghum | plastid | 64.63 | 65.43 |
| TraesCS5D01G021100.1 | Wheat | plastid | 62.2 | 65.38 |
| Zm00001d011185_P001 | Maize | plastid | 63.41 | 64.2 |
| Zm00001d044231_P001 | Maize | plastid | 63.41 | 64.2 |
| TraesCS3A01G207800.1 | Wheat | plastid | 64.63 | 63.86 |
| TraesCS3D01G208200.1 | Wheat | plastid | 64.63 | 63.86 |
| HORVU3Hr1G048610.1 | Barley | endoplasmic reticulum | 63.41 | 62.65 |
| Os01t0565900-01 | Rice | plastid | 60.98 | 62.5 |
| GSMUA_Achr9P04740_001 | Banana | plastid | 60.98 | 61.73 |
| TraesCS3B01G234900.1 | Wheat | plastid | 62.2 | 60.71 |
| Zm00001d044237_P001 | Maize | plastid | 59.76 | 60.49 |
| VIT_05s0094g00210.t01 | Wine grape | mitochondrion | 47.56 | 58.21 |
| Os12t0173366-01 | Rice | plastid | 57.32 | 56.63 |
| VIT_15s0021g02620.t01 | Wine grape | plastid | 73.17 | 53.57 |
| AT5G60460.1 | Thale cress | plastid | 59.76 | 44.95 |
| VIT_15s0021g02490.t01 | Wine grape | cytosol | 75.61 | 39.49 |
| GSMUA_Achr7P24220_001 | Banana | cytosol, mitochondrion, nucleus, peroxisome | 57.32 | 33.57 |
| VIT_05s0094g00170.t01 | Wine grape | cytosol | 67.07 | 31.43 |
Protein Annotations
| MapMan:23.3.1.3.2 | EntrezGene:819114 | UniProt:A0A178VTT1 | ProteinID:AEC10502.1 | ProteinID:AEC10503.1 | ProteinID:AEC10504.1 |
| ProteinID:AEC10505.1 | EMBL:AK317138 | EMBL:AK317272 | ArrayExpress:AT2G45070 | EnsemblPlantsGene:AT2G45070 | RefSeq:AT2G45070 |
| TAIR:AT2G45070 | RefSeq:AT2G45070-TAIR-G | EnsemblPlants:AT2G45070.3 | TAIR:AT2G45070.3 | UniProt:B9DGF7 | EMBL:BT000904 |
| GO:GO:0003674 | GO:GO:0005086 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005784 | GO:GO:0005789 |
| GO:GO:0006616 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0015031 | GO:GO:0015450 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0031204 | GO:GO:0031205 | GO:GO:0065009 | RefSeq:NP_001031539.1 |
| RefSeq:NP_001031540.1 | RefSeq:NP_001078061.1 | RefSeq:NP_182033.1 | ProteinID:OAP08605.1 | UniProt:P38389 | PFAM:PF03911 |
| PIRSF:PIRSF006398 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR13509 |
| PANTHER:PTHR13509:SF2 | Symbol:SEC61 BETA | InterPro:Sec61-beta/Sbh | InterPro:SecG/Sec61-beta/Sbh | TMHMM:TMhelix | UniParc:UPI0000001AF7 |
| EMBL:Z26753 | SEG:seg | : | : | : | : |
Description
SEC61 BETAProtein transport protein Sec61 subunit beta [Source:UniProtKB/TrEMBL;Acc:A0A178VTT1]
Coordinates
chr2:-:18586974..18588452
Molecular Weight (calculated)
8217.1 Da
IEP (calculated)
11.238
GRAVY (calculated)
0.382
Length
82 amino acids
Sequence
(BLAST)
(BLAST)
1: MVGSGAPQRG SAAATASMRR RKPTSGAGGG GASGGAAGSM LQFYTDDAPG LKISPNVVLI MSIGFIAFVA VLHVMGKLYF VK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.