Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- endoplasmic reticulum 2
- mitochondrion 4
- plastid 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G60540.2 | Thale cress | plastid | 66.67 | 66.67 |
| KRH76131 | Soybean | plastid | 65.43 | 64.63 |
| KRH65413 | Soybean | endoplasmic reticulum | 65.43 | 64.63 |
| Bra040326.1-P | Field mustard | plastid | 64.2 | 62.65 |
| CDY37026 | Canola | plastid | 64.2 | 62.65 |
| CDY27395 | Canola | mitochondrion, plastid | 61.73 | 62.5 |
| CDY18954 | Canola | plastid | 64.2 | 61.9 |
| PGSC0003DMT400018011 | Potato | mitochondrion | 64.2 | 61.9 |
| Bra000368.1-P | Field mustard | plastid | 61.73 | 60.98 |
| CDX83408 | Canola | plastid | 61.73 | 60.98 |
| AT2G45070.3 | Thale cress | plastid | 61.73 | 60.98 |
| Bra004887.1-P | Field mustard | plastid | 59.26 | 57.83 |
| CDX74708 | Canola | plastid | 59.26 | 57.83 |
| VIT_05s0094g00210.t01 | Wine grape | mitochondrion | 44.44 | 53.73 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, plasma membrane | 29.63 | 51.06 |
| VIT_15s0021g02620.t01 | Wine grape | plastid | 60.49 | 43.75 |
| GSMUA_Achr7P24220_001 | Banana | cytosol, mitochondrion, nucleus, peroxisome | 65.43 | 37.86 |
| GSMUA_Achr10P... | Banana | mitochondrion | 48.15 | 36.45 |
| GSMUA_Achr5P08440_001 | Banana | mitochondrion | 46.91 | 35.85 |
| GSMUA_Achr7P22710_001 | Banana | plastid | 46.91 | 35.19 |
| VIT_15s0021g02490.t01 | Wine grape | cytosol | 60.49 | 31.21 |
| VIT_05s0094g00170.t01 | Wine grape | cytosol | 59.26 | 27.43 |
Protein Annotations
| MapMan:23.3.1.3.2 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 |
| GO:GO:0005784 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| EnsemblPlantsGene:GSMUA_Achr9G04740_001 | EnsemblPlants:GSMUA_Achr9P04740_001 | EnsemblPlants:GSMUA_Achr9T04740_001 | UniProt:M0TXI3 | PFAM:PF03911 | PANTHER:PTHR13509 |
| PANTHER:PTHR13509:SF2 | InterPro:Sec61-beta/Sbh | InterPro:SecG/Sec61-beta/Sbh | TMHMM:TMhelix | UniParc:UPI000296F00C | SEG:seg |
Description
Protein transport protein Sec61 subunit beta [Source:GMGC_GENE;Acc:GSMUA_Achr9G04740_001]
Coordinates
chr9:+:3108090..3108617
Molecular Weight (calculated)
8037.9 Da
IEP (calculated)
11.890
GRAVY (calculated)
0.381
Length
81 amino acids
Sequence
(BLAST)
(BLAST)
1: MVAGGAPPRG SAAAAANMRR RRAAGGGAAA AGGGASTMLQ FYTDDATGAK MSPNTVLFMS IGLSAVVALL HVVGKLYFVP R
1: MVGGGAPQRG SAAATASMRR RKPAGGSSSA GGGAGTMLQF YTDDAPGLKI SPNVVLIMSI GFIAFVAVLH VMGKLYFVKS K
Arabidopsis Description
Protein transport protein Sec61 subunit beta [Source:UniProtKB/TrEMBL;Acc:Q9M206]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.