Factsheet for GSMUA_Achr7P24220_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, nucleus, cytosol

Predictor Summary:

plastid 1
endoplasmic reticulum 2
mitochondrion 3
peroxisome 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G234900.1	Wheat	plastid	47.86	79.76
Zm00001d044231_P001	Maize	plastid	45.71	79.01
HORVU3Hr1G048610.1	Barley	endoplasmic reticulum	46.43	78.31
TraesCS3D01G208200.1	Wheat	plastid	46.43	78.31
TraesCS3A01G207800.1	Wheat	plastid	46.43	78.31
Zm00001d011185_P001	Maize	plastid	45.0	77.78
EES00928	Sorghum	plastid	45.0	77.78
Os01t0565900-01	Rice	plastid	44.29	77.5
TraesCS5B01G013400.1	Wheat	plastid	43.57	77.22
TraesCS5A01G015200.1	Wheat	plastid	43.57	77.22
TraesCS5D01G021100.1	Wheat	plastid	42.86	76.92
Zm00001d044237_P001	Maize	plastid	44.29	76.54
Os12t0173366-01	Rice	plastid	40.0	67.47
CDY27395	Canola	mitochondrion, plastid	37.86	66.25
GSMUA_Achr9P04740_001	Banana	plastid	37.86	65.43
KRH76131	Soybean	plastid	37.86	64.63
KRH65413	Soybean	endoplasmic reticulum	37.86	64.63
Bra000368.1-P	Field mustard	plastid	37.86	64.63
CDX83408	Canola	plastid	37.86	64.63
AT3G60540.2	Thale cress	plastid	37.14	64.2
PGSC0003DMT400018011	Potato	mitochondrion	36.43	60.71
CDX74708	Canola	plastid	35.71	60.24
Bra004887.1-P	Field mustard	plastid	35.71	60.24
Bra040326.1-P	Field mustard	plastid	35.71	60.24
CDY37026	Canola	plastid	35.71	60.24
AT2G45070.3	Thale cress	plastid	33.57	57.32
CDY18954	Canola	plastid	34.29	57.14
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, plasma membrane	18.57	55.32
VIT_05s0094g00210.t01	Wine grape	mitochondrion	25.71	53.73
VIT_15s0021g02620.t01	Wine grape	plastid	38.57	48.21
GSMUA_Achr7P22710_001	Banana	plastid	30.0	38.89
GSMUA_Achr5P08440_001	Banana	mitochondrion	29.29	38.68
GSMUA_Achr10P...	Banana	mitochondrion	29.29	38.32
VIT_15s0021g02490.t01	Wine grape	cytosol	42.86	38.22
VIT_05s0094g00170.t01	Wine grape	cytosol	35.71	28.57

Protein Annotations

MapMan:23.3.1.3.2	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783
GO:GO:0005784	GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
EnsemblPlantsGene:GSMUA_Achr7G24220_001	EnsemblPlants:GSMUA_Achr7P24220_001	EnsemblPlants:GSMUA_Achr7T24220_001	UniProt:M0TKA8	PFAM:PF03911	PANTHER:PTHR13509
PANTHER:PTHR13509:SF2	InterPro:Sec61-beta/Sbh	InterPro:SecG/Sec61-beta/Sbh	TMHMM:TMhelix	UniParc:UPI000294BC3E	SEG:seg

Description

Protein transport protein Sec61 subunit beta [Source:GMGC_GENE;Acc:GSMUA_Achr7G24220_001]

Coordinates

chr7:-:26216338..26219025

Molecular Weight (calculated)

14998.1 Da

IEP (calculated)

10.746

GRAVY (calculated)

-0.255

Length

140 amino acids

Sequence
(BLAST)

001: MNKTTKTLQQ ILTHQRGRRR MMTAYINHID EPSCAASCLE DPAEESSRAA PSSSPSDIRV KMVANGEAPS RGSAAAAASM RRRRTGGAGA AAGANTMLQF
101: YTDETAGRKM SPNTVLIMSI GFIAIVAVLH VFGKLYRVPN

Best Arabidopsis Sequence Match ( AT3G60540.2 )
(BLAST)

1: MVGGGAPQRG SAAATASMRR RKPAGGSSSA GGGAGTMLQF YTDDAPGLKI SPNVVLIMSI GFIAFVAVLH VMGKLYFVKS K

Arabidopsis Description

Protein transport protein Sec61 subunit beta [Source:UniProtKB/TrEMBL;Acc:Q9M206]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.