Factsheet for VIT_05s0094g00210.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 1
endoplasmic reticulum 3
vacuole 1
plasma membrane 1
golgi 1
plastid 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	endoplasmic reticulum
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	endoplasmic reticulum
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH76131	Soybean	plastid	70.15	57.32
KRH65413	Soybean	endoplasmic reticulum	70.15	57.32
CDY27395	Canola	mitochondrion, plastid	62.69	52.5
TraesCS5B01G013400.1	Wheat	plastid	61.19	51.9
TraesCS5A01G015200.1	Wheat	plastid	61.19	51.9
Bra000368.1-P	Field mustard	plastid	62.69	51.22
CDX83408	Canola	plastid	62.69	51.22
PGSC0003DMT400018011	Potato	mitochondrion	64.18	51.19
Zm00001d011185_P001	Maize	plastid	61.19	50.62
Bra004887.1-P	Field mustard	plastid	62.69	50.6
CDX74708	Canola	plastid	62.69	50.6
TraesCS5D01G021100.1	Wheat	plastid	58.21	50.0
Zm00001d044237_P001	Maize	plastid	59.7	49.38
Zm00001d044231_P001	Maize	plastid	59.7	49.38
Os12t0173366-01	Rice	plastid	59.7	48.19
EES00928	Sorghum	plastid	58.21	48.15
AT2G45070.3	Thale cress	plastid	58.21	47.56
Os01t0565900-01	Rice	plastid	56.72	47.5
TraesCS3A01G207800.1	Wheat	plastid	58.21	46.99
TraesCS3D01G208200.1	Wheat	plastid	58.21	46.99
TraesCS3B01G234900.1	Wheat	plastid	58.21	46.43
CDY18954	Canola	plastid	58.21	46.43
HORVU3Hr1G048610.1	Barley	endoplasmic reticulum	56.72	45.78
GSMUA_Achr9P04740_001	Banana	plastid	53.73	44.44
AT3G60540.2	Thale cress	plastid	53.73	44.44
VIT_15s0021g02620.t01	Wine grape	plastid	73.13	43.75
CDY37026	Canola	plastid	52.24	42.17
Bra040326.1-P	Field mustard	plastid	52.24	42.17
VIT_15s0021g02490.t01	Wine grape	cytosol	76.12	32.48
VIT_13s0019g04080.t01	Wine grape	plastid	49.25	30.56
VIT_05s0094g00170.t01	Wine grape	cytosol	68.66	26.29
GSMUA_Achr7P24220_001	Banana	cytosol, mitochondrion, nucleus, peroxisome	53.73	25.71

Protein Annotations

EntrezGene:109122671	MapMan:23.3.1.3.2	ProteinID:CCB49361	ProteinID:CCB49361.1	UniProt:F6HB08	EMBL:FN595507
GO:GO:0003674	GO:GO:0005086	GO:GO:0005215	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005784	GO:GO:0006616
GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0015450	GO:GO:0016020	GO:GO:0031204
GO:GO:0031205	GO:GO:0065009	PFAM:PF03911	PANTHER:PTHR13509	PANTHER:PTHR13509:SF2	InterPro:Sec61-beta/Sbh
InterPro:SecG/Sec61-beta/Sbh	UniParc:UPI00015CC438	ArrayExpress:VIT_05s0094g00210	EnsemblPlantsGene:VIT_05s0094g00210	EnsemblPlants:VIT_05s0094g00210.t01	RefSeq:XP_019075690.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5:+:23547820..23548071

Molecular Weight (calculated)

6786.1 Da

IEP (calculated)

10.020

GRAVY (calculated)

-0.045

Length

67 amino acids

Sequence
(BLAST)

1: MVLNGATPPR GSAAAASSLR RRRTTGGAAA GGASGNILQF YTDDAPGLKI SPNVVLVMNI EYSPCHG

Best Arabidopsis Sequence Match ( AT3G60540.1 )
(BLAST)

1: MVGGGAPQRG SAAATASMRR RKPAGGSSSA GGGAGTMLQF YTDDAPGLKI SPNVVLIMSI GFIAFVAVLH VMGKLYFVKS K

Arabidopsis Description

Protein transport protein Sec61 subunit beta [Source:UniProtKB/TrEMBL;Acc:Q9M206]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.