Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- endoplasmic reticulum 2
- mitochondrion 2
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH26396 | Soybean | endoplasmic reticulum | 72.22 | 74.29 |
| AT5G60460.1 | Thale cress | plastid | 69.44 | 68.81 |
| PGSC0003DMT400051074 | Potato | mitochondrion, plastid | 49.07 | 67.95 |
| Bra006659.1-P | Field mustard | plastid | 68.52 | 67.89 |
| CDX88759 | Canola | plastid | 68.52 | 67.89 |
| KRH38145 | Soybean | golgi, plastid, vacuole | 43.52 | 67.14 |
| CDY67667 | Canola | plastid | 67.59 | 66.97 |
| PGSC0003DMT400090964 | Potato | plastid | 65.74 | 66.36 |
| Solyc03g116990.1.1 | Tomato | plastid | 66.67 | 66.06 |
| Solyc06g010060.1.1 | Tomato | nucleus | 67.59 | 65.18 |
| Bra002478.1-P | Field mustard | plastid | 64.81 | 64.22 |
| CDY31544 | Canola | plastid | 64.81 | 64.22 |
| KRH01163 | Soybean | plastid | 49.07 | 63.86 |
| CDX80167 | Canola | plastid | 63.89 | 63.3 |
| KRH01231 | Soybean | mitochondrion | 48.15 | 62.65 |
| VIT_05s0094g00210.t01 | Wine grape | mitochondrion | 30.56 | 49.25 |
| VIT_15s0021g02620.t01 | Wine grape | plastid | 45.37 | 43.75 |
| VIT_15s0021g02490.t01 | Wine grape | cytosol | 46.3 | 31.85 |
| VIT_05s0094g00170.t01 | Wine grape | cytosol | 41.67 | 25.71 |
Protein Annotations
| EntrezGene:100247887 | wikigene:100247887 | MapMan:23.3.1.3.2 | UniProt:A5AE58 | EMBL:AM424341 | ProteinID:CAN75561 |
| ProteinID:CAN75561.1 | ProteinID:CCB56197 | ProteinID:CCB56197.1 | EMBL:FN595998 | GO:GO:0003674 | GO:GO:0005086 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005784 | GO:GO:0005794 | GO:GO:0005886 | GO:GO:0006616 |
| GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0015031 | GO:GO:0015450 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0031204 | GO:GO:0031205 | GO:GO:0065009 | EntrezGene:LOC100247887 | wikigene:LOC100247887 |
| PFAM:PF03911 | PIRSF:PIRSF006398 | PANTHER:PTHR13509 | PANTHER:PTHR13509:SF8 | InterPro:Sec61-beta/Sbh | InterPro:SecG/Sec61-beta/Sbh |
| TMHMM:TMhelix | UniParc:UPI000151E5BB | ArrayExpress:VIT_13s0019g04080 | EnsemblPlantsGene:VIT_13s0019g04080 | EnsemblPlants:VIT_13s0019g04080.t01 | unigene:Vvi.15260 |
| RefSeq:XP_002276029 | RefSeq:XP_002276029.1 | SEG:seg | : | : | : |
Description
Protein transport protein Sec61 subunit beta [Source:UniProtKB/TrEMBL;Acc:A5AE58]
Coordinates
chr13:+:5365543..5366061
Molecular Weight (calculated)
10916.1 Da
IEP (calculated)
12.336
GRAVY (calculated)
0.052
Length
108 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRGSSQSQA SSSVTSRPST VGMAPRGSAA ATAGMRRRRL GTGSAGGGSG GFGSGSSGSN MLRFYTDDAP GLKITPTVVL VMSLCFIGFV TALHVFGKIY
101: RHRSGGVA
101: RHRSGGVA
001: MARGSSQSQQ STSTGSSTAR PGLAAPRGSA AATAGMRRRR LGGGGGVSSG GGSGVGSGSS NMLRFYTDDA PGLKISPTVV LIMSLCFIGF VTALHVFGKL
101: YLHKSGSQA
101: YLHKSGSQA
Arabidopsis Description
Protein transport protein Sec61 subunit beta [Source:UniProtKB/TrEMBL;Acc:Q9FKK1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.