Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 3
- cytosol 1
- plasma membrane 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000368.1-P | Field mustard | plastid | 100.0 | 97.56 |
| CDX83408 | Canola | plastid | 100.0 | 97.56 |
| CDX74708 | Canola | plastid | 91.25 | 87.95 |
| CDY18954 | Canola | plastid | 86.25 | 82.14 |
| CDY37026 | Canola | plastid | 83.75 | 80.72 |
| KRH65413 | Soybean | endoplasmic reticulum | 82.5 | 80.49 |
| KRH76131 | Soybean | plastid | 82.5 | 80.49 |
| AT2G45070.3 | Thale cress | plastid | 81.25 | 79.27 |
| PGSC0003DMT400018011 | Potato | mitochondrion | 78.75 | 75.0 |
| Zm00001d044231_P001 | Maize | plastid | 66.25 | 65.43 |
| TraesCS5B01G013400.1 | Wheat | plastid | 63.75 | 64.56 |
| TraesCS5A01G015200.1 | Wheat | plastid | 63.75 | 64.56 |
| Zm00001d011185_P001 | Maize | plastid | 65.0 | 64.2 |
| EES00928 | Sorghum | plastid | 65.0 | 64.2 |
| TraesCS5D01G021100.1 | Wheat | plastid | 62.5 | 64.1 |
| Os01t0565900-01 | Rice | plastid | 63.75 | 63.75 |
| TraesCS3B01G234900.1 | Wheat | plastid | 66.25 | 63.1 |
| VIT_05s0094g00210.t01 | Wine grape | mitochondrion | 52.5 | 62.69 |
| GSMUA_Achr9P04740_001 | Banana | plastid | 62.5 | 61.73 |
| TraesCS3A01G207800.1 | Wheat | plastid | 63.75 | 61.45 |
| TraesCS3D01G208200.1 | Wheat | plastid | 63.75 | 61.45 |
| Zm00001d044237_P001 | Maize | plastid | 61.25 | 60.49 |
| HORVU3Hr1G048610.1 | Barley | endoplasmic reticulum | 62.5 | 60.24 |
| VIT_15s0021g02620.t01 | Wine grape | plastid | 78.75 | 56.25 |
| Os12t0173366-01 | Rice | plastid | 57.5 | 55.42 |
| CDY31544 | Canola | plastid | 62.5 | 45.87 |
| CDX80167 | Canola | plastid | 62.5 | 45.87 |
| CDY67667 | Canola | plastid | 58.75 | 43.12 |
| CDX88759 | Canola | plastid | 58.75 | 43.12 |
| VIT_15s0021g02490.t01 | Wine grape | cytosol | 78.75 | 40.13 |
| GSMUA_Achr7P24220_001 | Banana | cytosol, mitochondrion, nucleus, peroxisome | 66.25 | 37.86 |
| VIT_05s0094g00170.t01 | Wine grape | cytosol | 70.0 | 32.0 |
Protein Annotations
| MapMan:23.3.1.3.2 | GO:A0A078GLC2 | UniProt:A0A078GLC2 | EnsemblPlants:CDY27395 | ProteinID:CDY27395 | ProteinID:CDY27395.1 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005784 |
| GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016021 |
| EnsemblPlantsGene:GSBRNA2T00037344001 | PFAM:PF03911 | PIRSF:PIRSF006398 | PANTHER:PTHR13509 | PANTHER:PTHR13509:SF2 | InterPro:Sec61-beta/Sbh |
| InterPro:SecG/Sec61-beta/Sbh | TMHMM:TMhelix | UniParc:UPI0004EB7022 | SEG:seg | : | : |
Description
BnaC04g50100DProtein transport protein Sec61 subunit beta [Source:UniProtKB/TrEMBL;Acc:A0A078GLC2]
Coordinates
chrLK032203:+:468205..468978
Molecular Weight (calculated)
8030.9 Da
IEP (calculated)
11.238
GRAVY (calculated)
0.400
Length
80 amino acids
Sequence
(BLAST)
(BLAST)
1: MVGSGAPQRG SAAAAASMRR RKPSGSGGGA SGGAAGSMLQ FYTDDAPGLK ISPNVVLVMS IGFIAFVAVL HVMGKLYFVK
1: MVGSGAPQRG SAAATASMRR RKPTSGAGGG GASGGAAGSM LQFYTDDAPG LKISPNVVLI MSIGFIAFVA VLHVMGKLYF VK
Arabidopsis Description
SEC61 BETAProtein transport protein Sec61 subunit beta [Source:UniProtKB/TrEMBL;Acc:A0A178VTT1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.