Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- endoplasmic reticulum 2
- mitochondrion 3
- golgi 1
- plasma membrane 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G45070.3 | Thale cress | plastid | 83.95 | 82.93 |
| KRH65413 | Soybean | endoplasmic reticulum | 77.78 | 76.83 |
| KRH76131 | Soybean | plastid | 77.78 | 76.83 |
| PGSC0003DMT400018011 | Potato | mitochondrion | 74.07 | 71.43 |
| GSMUA_Achr9P04740_001 | Banana | plastid | 66.67 | 66.67 |
| TraesCS5B01G013400.1 | Wheat | plastid | 62.96 | 64.56 |
| TraesCS5A01G015200.1 | Wheat | plastid | 62.96 | 64.56 |
| Zm00001d011185_P001 | Maize | plastid | 62.96 | 62.96 |
| TraesCS5D01G021100.1 | Wheat | plastid | 59.26 | 61.54 |
| Os01t0565900-01 | Rice | plastid | 60.49 | 61.25 |
| TraesCS3B01G234900.1 | Wheat | plastid | 62.96 | 60.71 |
| TraesCS3A01G207800.1 | Wheat | plastid | 61.73 | 60.24 |
| TraesCS3D01G208200.1 | Wheat | plastid | 61.73 | 60.24 |
| Zm00001d044231_P001 | Maize | plastid | 59.26 | 59.26 |
| EES00928 | Sorghum | plastid | 59.26 | 59.26 |
| HORVU3Hr1G048610.1 | Barley | endoplasmic reticulum | 60.49 | 59.04 |
| Os12t0173366-01 | Rice | plastid | 59.26 | 57.83 |
| Zm00001d044237_P001 | Maize | plastid | 55.56 | 55.56 |
| VIT_05s0094g00210.t01 | Wine grape | mitochondrion | 44.44 | 53.73 |
| VIT_15s0021g02620.t01 | Wine grape | plastid | 69.14 | 50.0 |
| AT5G60460.1 | Thale cress | plastid | 64.2 | 47.71 |
| GSMUA_Achr7P24220_001 | Banana | cytosol, mitochondrion, nucleus, peroxisome | 64.2 | 37.14 |
| VIT_15s0021g02490.t01 | Wine grape | cytosol | 70.37 | 36.31 |
| VIT_05s0094g00170.t01 | Wine grape | cytosol | 62.96 | 29.14 |
Protein Annotations
| MapMan:23.3.1.3.2 | EntrezGene:825225 | ProteinID:AEE80076.1 | ProteinID:AEE80077.1 | ProteinID:ANM65142.1 | ArrayExpress:AT3G60540 |
| EnsemblPlantsGene:AT3G60540 | RefSeq:AT3G60540 | TAIR:AT3G60540 | RefSeq:AT3G60540-TAIR-G | EnsemblPlants:AT3G60540.2 | TAIR:AT3G60540.2 |
| Unigene:At.34426 | ProteinID:CAB81840.1 | GO:GO:0003674 | GO:GO:0005086 | GO:GO:0005215 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 |
| GO:GO:0005784 | GO:GO:0006616 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0015031 |
| GO:GO:0015450 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0031204 | GO:GO:0031205 | GO:GO:0065009 |
| RefSeq:NP_001327136.1 | RefSeq:NP_191613.1 | RefSeq:NP_974467.1 | PFAM:PF03911 | PIRSF:PIRSF006398 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000191 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR13509 | PANTHER:PTHR13509:SF2 | UniProt:Q9M206 | InterPro:Sec61-beta/Sbh |
| InterPro:SecG/Sec61-beta/Sbh | TMHMM:TMhelix | UniParc:UPI000009EC0B | SEG:seg | : | : |
Description
Protein transport protein Sec61 subunit beta [Source:UniProtKB/TrEMBL;Acc:Q9M206]
Coordinates
chr3:-:22374963..22375916
Molecular Weight (calculated)
8217.2 Da
IEP (calculated)
11.330
GRAVY (calculated)
0.321
Length
81 amino acids
Sequence
(BLAST)
(BLAST)
1: MVGGGAPQRG SAAATASMRR RKPAGGSSSA GGGAGTMLQF YTDDAPGLKI SPNVVLIMSI GFIAFVAVLH VMGKLYFVKS K
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.