Factsheet for ATCG00350.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plasma membrane 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, plastid
Any Predictor:	cytosol, nucleus, plasma membrane, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43223	Canola	extracellular	18.93	94.67
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	33.33	94.34
TraesCS1B01G189100.1	Wheat	cytosol, plasma membrane, plastid	23.2	93.05
PGSC0003DMT400041230	Potato	plastid	22.13	92.22
KRG88966	Soybean	cytosol, plastid	15.07	91.13
HORVU6Hr1G037020.1	Barley	plastid	24.67	84.09
ATCG00340.1	Thale cress	golgi, mitochondrion, plasma membrane, plastid	34.8	35.56

Protein Annotations

MapMan:1.1.4.2.1	Gene3D:1.20.1130.10	EntrezGene:844768	UniProt:A0A1B1W4T6	ProteinID:ANW47790.1	ArrayExpress:ATCG00350
EnsemblPlantsGene:ATCG00350	RefSeq:ATCG00350	TAIR:ATCG00350	RefSeq:ATCG00350-TAIR-G	EnsemblPlants:ATCG00350.1	TAIR:ATCG00350.1
ProteinID:BAA84385.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006091	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009055	GO:GO:0009507	GO:GO:0009522	GO:GO:0009534	GO:GO:0009535
GO:GO:0009536	GO:GO:0009579	GO:GO:0009941	GO:GO:0009987	GO:GO:0010287	GO:GO:0015979
GO:GO:0016020	GO:GO:0016021	GO:GO:0016168	GO:GO:0016491	GO:GO:0018298	GO:GO:0019538
GO:GO:0022900	GO:GO:0046872	GO:GO:0051536	GO:GO:0051539	GO:GO:0055114	InterPro:IPR036408
EMBL:L36246	HAMAP:MF_00458	RefSeq:NP_051059.1	UniProt:P56766	PFAM:PF00223	PIRSF:PIRSF002905
PRINTS:PR00257	ScanProsite:PS00419	Symbol:PSAA	InterPro:PSI_PsaA	InterPro:PSI_PsaA/B	InterPro:PSI_PsaA/B_CS
InterPro:PSI_PsaA/B_sf	PANTHER:PTHR30128	PANTHER:PTHR30128:SF8	SUPFAM:SSF81558	TIGRFAMs:TIGR01335	TMHMM:TMhelix
UniParc:UPI0000132474	SEG:seg	:	:	:	:

Description

PSAAPhotosystem I P700 chlorophyll a apoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:P56766]

Coordinates

chrPt:-:39605..41857

Molecular Weight (calculated)

83235.3 Da

IEP (calculated)

7.117

GRAVY (calculated)

0.252

Length

750 amino acids

Sequence
(BLAST)

001: MIIRSPEPEV KILVDRDPIK TSFEEWAKPG HFSRTIAKGP DTTTWIWNLH ADAHDFDSHT SDLEEISRKV FSAHFGQLSI IFLWLSGMYF HGARFSNYEA
101: WLSDPTHIGP SAQVVWPIVG QEILNGDVGG GFRGIQITSG FFQIWRASGI TSELQLYCTA IGALVFAALM LFAGWFHYHK AAPKLAWFQD VESMLNHHLA
201: GLLGLGSLSW AGHQVHVSLP INQFLNAGVD PKEIPLPHEF ILNRDLLAQL YPSFAEGATP FFTLNWSKYS EFLTFRGGLD PVTGGLWLTD IAHHHLAIAI
301: LFLIAGHMYR TNWGIGHGIK DILEAHKGPF TGQGHKGLYE ILTTSWHAQL SLNLAMLGSL TIIVAHHMYS MPPYPYLATD YATQLSLFTH HMWIGGFLIV
401: GAAAHAAIFM VRDYDPTNRY NDLLDRVLRH RDAIISHLNW VCIFLGFHSF GLYIHNDTMS ALGRPQDMFS DTAIQLQPVF AQWIQNTHAL APGVTAPGET
501: ASTSLTWGGG ELVAVGGKVA LLPIPLGTAD FLVHHIHAFT IHVTVLILLK GVLFARSSRL IPDKANLGFR FPCDGPGRGG TCQVSAWDHV FLGLFWMYNA
601: ISVVIFHFSW KMQSDVWGSI SDQGVVTHIT GGNFAQSSIT INGWLRDFLW AQASQVIQSY GSSLSAYGLF FLGAHFVWAF SLMFLFSGRG YWQELIESIV
701: WAHNKLKVAP ATQPRALSII QGRAVGVTHY LLGGIATTWA FFLARIIAVG

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.