Factsheet for Bra007490.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
peroxisome 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY05966	Canola	cytosol	93.1	93.1
Bra003395.1-P	Field mustard	cytosol	36.95	33.78
Bra007493.1-P	Field mustard	cytosol	36.95	33.71
Bra014523.1-P	Field mustard	cytosol	36.7	33.56
Bra004805.1-P	Field mustard	cytosol	34.98	31.98
Bra006026.1-P	Field mustard	cytosol	28.82	26.65
Bra009390.1-P	Field mustard	cytosol	28.82	26.29
Bra028630.1-P	Field mustard	cytosol	28.82	19.09
Bra029586.1-P	Field mustard	peroxisome	10.34	7.41

Protein Annotations

MapMan:22.8.4.2	Gene3D:3.30.519.10	EnsemblPlantsGene:Bra007490	EnsemblPlants:Bra007490.1	EnsemblPlants:Bra007490.1-P	InterPro:FAD/NAD-bd_sf
InterPro:GDP_dissociation_inhibitor	GO:GO:0003674	GO:GO:0005092	GO:GO:0005093	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006810	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150
GO:GO:0009987	GO:GO:0015031	GO:GO:0030234	GO:GO:0050790	InterPro:IPR036188	UniProt:M4CTE7
PFAM:PF00996	PRINTS:PR00892	PANTHER:PTHR11787	PANTHER:PTHR11787:SF11	InterPro:RabGDI	SUPFAM:SSF51905
SUPFAM:SSF54373	UniParc:UPI0002542F49	:	:	:	:

Description

AT3G59920 (E=5e-064) ATGDI2 | ATGDI2 (RAB GDP DISSOCIATION INHIBITOR 2); RAB GDP-dissociation inhibitor

Coordinates

chrA09:+:29464075..29466322

Molecular Weight (calculated)

45633.9 Da

IEP (calculated)

4.985

GRAVY (calculated)

-0.353

Length

406 amino acids

Sequence
(BLAST)

001: MKDQEINEIS GKIVRSTVQG KRCGIPHVFP SDLCSNPWEL EGFVFNRELE LDETRRSWVF FCENNPEDFG TVWKLVGGSK EISPGIYCQK YILTPDYASP
101: GGRFLLSKVT GWRFSLALYW MTFLAAEPKV ESEEDGKVTV VPSEGETSKR KLIDCDPSSQ LPNKATKIGR VDGAMESPNT NVSHSVHVLA HKSDMYVFCL
201: YSHNVAAKGK FIAFASTDAE TDNPQTELKA GIDLLGPVDE IFFDMYDRYE PVNEPASDNC FISTSYDATT HFETTVADVL NMYTLITGED YNEKDSKTHS
301: GMVDNTIAIM SHPIPNTNDP RSVHVIISQK QLAHKSDILK MKAILMLVVN PSLDHNFIAK TDNYFAMFRK YNDVCLLLFI LPQRGPPRES SSHLFLNDAE
401: TDNPQP

Best Arabidopsis Sequence Match ( AT1G28765.1 )
(BLAST)

1: MEHMRHLLRH QTLQKTLMEH MRHVLQHQTL QKWKLCLMHT LFECFESEKS SIEAPYIACL SQRVFPEYGS PRRQTSLLLI EDEQDDNDTP YD

Arabidopsis Description

SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.