Factsheet for Bra016684.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4
mitochondrion 1
plastid 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	vacuole
Plant-mPloc:	nucleus, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX84015	Canola	cytosol	20.28	87.88
Bra016685.1-P	Field mustard	cytosol	38.81	61.67
AT1G14688.1	Thale cress	cytosol, mitochondrion, plasma membrane, plastid	25.52	42.94
Bra027667.1-P	Field mustard	endoplasmic reticulum, golgi	25.17	20.99
Bra007725.1-P	Field mustard	plasma membrane	23.08	17.28
Bra040424.1-P	Field mustard	endoplasmic reticulum, extracellular	19.93	16.38
GSMUA_Achr10P...	Banana	extracellular, plasma membrane, plastid	11.89	14.11

Protein Annotations

MapMan:19.2.2.1.5.3.2	InterPro:Aspartic_peptidase_AS	EnsemblPlantsGene:Bra016684	EnsemblPlants:Bra016684.1	EnsemblPlants:Bra016684.1-P	InterPro:GIDE
GO:GO:0003674	GO:GO:0003824	GO:GO:0004190	GO:GO:0004842	GO:GO:0005575	GO:GO:0006464
GO:GO:0006508	GO:GO:0006996	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016043	GO:GO:0016567	GO:GO:0016740	GO:GO:0016787	GO:GO:0019538
UniProt:M4DJK6	PFAM:PF12483	ScanProsite:PS00141	PANTHER:PTHR12183	PANTHER:PTHR12183:SF18	TMHMM:TMhelix
UniParc:UPI0002545A8C	SEG:seg	:	:	:	:

Description

AT1G14688 (E=5e-017) | unknown protein

Coordinates

chrA08:+:19549502..19551655

Molecular Weight (calculated)

31848.8 Da

IEP (calculated)

4.658

GRAVY (calculated)

-0.221

Length

286 amino acids

Sequence
(BLAST)

001: MKSLRFAILK FEVLNNLYRL VSPLGMSDFG VVLGYDISDL RNGLRKADSF NSITRVADIK CLDDLLKEKA SNLLVVLSGK VASATPFNCK HDDDSSSGDV
101: FEAKFEMEYE TKKDDDGGLI HKSHNFLLQI NETPWYLEDG TGLVKVVRAE LADGYVDTMK PQFDMLSMSE IFQRFENPQE GSKVICRCAL DTGTSLTIVG
201: EAARDEAGTL SIQNPKEQSF MIFSGEGSFD KMVANLKSNS EFYFFYSKIF GTIAVAIAVV KGVGFVRRVL RERSENATDS DNEENP

Best Arabidopsis Sequence Match ( AT1G14688.1 )
(BLAST)

001: MFLLVWNSKP TSFYDLLKEK TTNLLVLVSG RVASATTFNS KDGDLLGVVF ENTVIFGQAL KVGTSLTFVG EAVRDKAGNL MIQKSKEQSL IVFSEESSFD
101: EMVNNMKSQS ELCVILAKIF GSIAVAIAVV YGVDYARKVL LPFVWKKKDL GDSSSQNGSS DSEDTDISDF

Arabidopsis Description

FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: E3 Ubiquitin ligase (InterPro:IPR022170); Has 30201 Blast hits to 17322 proteins in 780 species: A /.../- 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT1G14688]
SUBAcon: [mitochondrion,plasma membrane,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.