Factsheet for Bra007725.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 4
mitochondrion 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY63334	Canola	endoplasmic reticulum, extracellular	89.01	87.4
Bra040424.1-P	Field mustard	endoplasmic reticulum, extracellular	53.4	58.62
AT1G59560.1	Thale cress	endoplasmic reticulum, extracellular, golgi	49.48	55.92
Bra027667.1-P	Field mustard	endoplasmic reticulum, golgi	47.91	53.35
KRH71471	Soybean	endoplasmic reticulum, golgi	44.5	50.15
KRH31972	Soybean	endoplasmic reticulum, golgi	43.72	49.26
VIT_07s0104g00630.t01	Wine grape	plasma membrane, vacuole	43.98	48.98
Os07t0647800-01	Rice	endoplasmic reticulum	36.65	48.78
PGSC0003DMT400051847	Potato	endoplasmic reticulum, golgi	43.46	48.54
EER99814	Sorghum	endoplasmic reticulum, golgi	42.41	47.23
TraesCS2D01G141100.1	Wheat	endoplasmic reticulum, golgi	40.84	45.75
TraesCS2B01G162000.1	Wheat	endoplasmic reticulum, golgi	40.84	45.75
HORVU2Hr1G024550.6	Barley	endoplasmic reticulum, golgi	40.84	45.75
TraesCS2A01G138100.2	Wheat	endoplasmic reticulum, golgi	40.58	45.45
Solyc06g084360.2.1	Tomato	nucleus	43.72	43.83
GSMUA_Achr9P07520_001	Banana	cytosol, mitochondrion, plastid, vacuole	6.28	36.36
Zm00001d007060_P003	Maize	extracellular, plasma membrane	35.08	33.0
Bra016685.1-P	Field mustard	cytosol	12.57	26.67
Bra016684.1-P	Field mustard	plasma membrane, vacuole	17.28	23.08

Protein Annotations

MapMan:19.2.2.1.5.3.2	MapMan:19.2.5.1	Gene3D:3.30.40.10	EnsemblPlantsGene:Bra007725	EnsemblPlants:Bra007725.1	EnsemblPlants:Bra007725.1-P
InterPro:GIDE	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0006464	GO:GO:0006996
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016567	GO:GO:0016740
GO:GO:0019538	InterPro:IPR001841	InterPro:IPR013083	UniProt:M4CU31	PFAM:PF12483	PFAM:PF13920
PFscan:PS50089	PANTHER:PTHR12183	PANTHER:PTHR12183:SF18	SUPFAM:SSF57850	SignalP:SignalP-noTM	UniParc:UPI0002542B9D
InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:

Description

AT1G59560 (E=3e-074) ZCF61 | ZCF61; protein binding / zinc ion binding

Coordinates

chrA09:-:30575396..30577446

Molecular Weight (calculated)

42743.7 Da

IEP (calculated)

7.996

GRAVY (calculated)

0.295

Length

382 amino acids

Sequence
(BLAST)

001: MISWSGFKCF IWAYLLYLLS RRTGGGGDVE FFDSVTKVDH LKGLAELLEE GREVRPLIVA VTGSVASATP FKCQRSEMLA VILEETEEIQ FLKRNWKFSW
101: VQDTASISLP ITKQVPWFLE DGTGRVNVSG AETALGFAFT VGSEVFEKPE ASSLLPGALA YLQGLKMLGV RRFEYVLPIG TWLTVVGEAV KDGSGNVRIQ
201: KPDQGPFYIS PKPLDQLIPT LGTWSRIFKY ASMGASFCFT VRGVIITSKP LIIYILHVIE DILFMFGYIL WRMRQGLPIL KKHVTLLKRV FCAAANRTRQ
301: ATEEGLCESF FPEYACEFAL IISLAPDVPD LCVICLDRKC DAVFLECGHM CCCLTCSLSL ELQGKRCPLC RKPVVVLKIY RI

Best Arabidopsis Sequence Match ( AT1G59560.1 )
(BLAST)

001: MIHLAGFTCC LGGVALYLLT RSTGRDIKSI TRVYQLKDLE QLVEVESKVV PLIIAVSGDV GSETPIKCEH SYVLGVFLKR TAEQQVLRRN WRFSWVRNST
101: LMQPMTKEVP WYLDDGTGRV NVDVSQGELG LALTVGSDVF EKAEPVSLVQ GALGYLKGFK ILGVRHVERV VPIGTPLTVV GEAVRDGMGN VRIQKPEQGP
201: FYVTYIPLDQ LISKLGDLSR RFKYASMGLT VLGVILISKP VIEYILKRIE DTLERRRRQF ALKRVVDAAA RRAKPVTGGG TSRDGDTPDL CVVCLDQKYN
301: TAFVECGHMC CCTPCSLQLR TCPLCRERIQ QVLKIYRH

Arabidopsis Description

SPL1E3 ubiquitin-protein ligase SPL1 [Source:UniProtKB/Swiss-Prot;Acc:Q94HV7]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.