CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007725.1-P	Field mustard	plasma membrane	87.4	89.01
CDX89169	Canola	extracellular	53.73	59.71
CDX93939	Canola	extracellular	52.96	58.52
AT1G59560.1	Thale cress	endoplasmic reticulum, extracellular, golgi	49.1	56.51
CDY25541	Canola	endoplasmic reticulum, vacuole	47.81	54.55
CDY34384	Canola	endoplasmic reticulum, vacuole	47.81	54.23
KRH71471	Soybean	endoplasmic reticulum, golgi	44.99	51.62
KRH31972	Soybean	endoplasmic reticulum, golgi	44.22	50.74
Os07t0647800-01	Rice	endoplasmic reticulum	36.25	49.13
PGSC0003DMT400051847	Potato	endoplasmic reticulum, golgi	43.19	49.12
VIT_07s0104g00630.t01	Wine grape	plasma membrane, vacuole	43.19	48.98
EER99814	Sorghum	endoplasmic reticulum, golgi	41.9	47.52
HORVU2Hr1G024550.6	Barley	endoplasmic reticulum, golgi	40.36	46.04
TraesCS2B01G162000.1	Wheat	endoplasmic reticulum, golgi	40.36	46.04
TraesCS2D01G141100.1	Wheat	endoplasmic reticulum, golgi	40.36	46.04
TraesCS2A01G138100.2	Wheat	endoplasmic reticulum, golgi	40.1	45.75
Solyc06g084360.2.1	Tomato	nucleus	43.44	44.36
GSMUA_Achr9P07520_001	Banana	cytosol, mitochondrion, plastid, vacuole	6.17	36.36
Zm00001d007060_P003	Maize	extracellular, plasma membrane	34.7	33.25
CDX70390	Canola	cytosol	14.4	30.6
CDY52033	Canola	cytosol	12.85	27.78
CDX84016	Canola	extracellular, mitochondrion, plasma membrane, plastid	18.77	27.65
CDY52031	Canola	mitochondrion	18.25	26.79
CDX84015	Canola	cytosol	4.11	24.24

Protein Annotations

KEGG:00220+6.3.2.-	KEGG:00261+6.3.2.-	KEGG:00380+6.3.2.-	MapMan:19.2.2.1.5.3.2	MapMan:19.2.5.1	Gene3D:3.30.40.10
GO:A0A078JER4	UniProt:A0A078JER4	EnsemblPlants:CDY63334	ProteinID:CDY63334	ProteinID:CDY63334.1	InterPro:GIDE
GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0006464	GO:GO:0006996	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00039194001	InterPro:IPR001841	InterPro:IPR013083	PFAM:PF12483	PFAM:PF13920	PFscan:PS50089
PANTHER:PTHR12183	PANTHER:PTHR12183:SF18	SUPFAM:SSF57850	SignalP:SignalP-noTM	UniPathway:UPA00143	UniParc:UPI0004EE9153
InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:

Description

BnaA09g55600DBnaA09g55600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JER4]

Coordinates

chrLK034284:-:18813..21192

Molecular Weight (calculated)

43856.3 Da

IEP (calculated)

9.303

GRAVY (calculated)

0.196

Length

389 amino acids

Sequence
(BLAST)

001: MISWSGFKCF IWAYLLYLLS RRTGGGGDVE FFDSVTKVDH LKGLAELLEE GREVRPLIVA VTGSVASATP FKCQRSEMLA VILEETEEIQ FLKRNWKFSW
101: VQDTASISLP ITKQVPWFLE DGTGRVNVSG AETALGFAFT VGSEVFEKPE PSSLLPGALA YLQGLKMLGV RRFEYVLPIG TWLTVVGEAV KDGSGNVRIQ
201: KPDQGPFYIS PKPLDQLIPT LGTWSRLIFK YASMGASFCF TVRGVIITSK PLIIYILHVI EDILFMFGYI LWRMRQGLPI LKKHVTLLKR GLGAVSKYIL
301: VRSRAFIERR RHRLLRNRVF CAAANRTRQA TEEDVPDLCV ICLDRKCDAV FLECGHMCCC LTCSLSLELQ GKRCPLCRKP VVVLKIYRI

Best Arabidopsis Sequence Match ( AT1G59560.1 )
(BLAST)

001: MIHLAGFTCC LGGVALYLLT RSTGRDIKSI TRVYQLKDLE QLVEVESKVV PLIIAVSGDV GSETPIKCEH SYVLGVFLKR TAEQQVLRRN WRFSWVRNST
101: LMQPMTKEVP WYLDDGTGRV NVDVSQGELG LALTVGSDVF EKAEPVSLVQ GALGYLKGFK ILGVRHVERV VPIGTPLTVV GEAVRDGMGN VRIQKPEQGP
201: FYVTYIPLDQ LISKLGDLSR RFKYASMGLT VLGVILISKP VIEYILKRIE DTLERRRRQF ALKRVVDAAA RRAKPVTGGG TSRDGDTPDL CVVCLDQKYN
301: TAFVECGHMC CCTPCSLQLR TCPLCRERIQ QVLKIYRH

Arabidopsis Description

SPL1E3 ubiquitin-protein ligase SPL1 [Source:UniProtKB/Swiss-Prot;Acc:Q94HV7]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.