Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- vacuole 1
- plastid 1
- mitochondrion 1
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016685.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDX84015 | Canola | cytosol | 25.0 | 68.18 |
| CDX84016 | Canola | extracellular, mitochondrion, plasma membrane, plastid | 77.78 | 53.03 |
| CDY52031 | Canola | mitochondrion | 62.22 | 42.26 |
| AT1G14688.1 | Thale cress | cytosol, mitochondrion, plasma membrane, plastid | 27.22 | 28.82 |
| CDX70390 | Canola | cytosol | 28.33 | 27.87 |
| CDY34384 | Canola | endoplasmic reticulum, vacuole | 30.0 | 15.74 |
| CDY25541 | Canola | endoplasmic reticulum, vacuole | 29.44 | 15.54 |
| CDY63334 | Canola | endoplasmic reticulum, extracellular | 27.78 | 12.85 |
| CDX93939 | Canola | extracellular | 23.89 | 12.22 |
| CDX89169 | Canola | extracellular | 23.33 | 12.0 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane, plastid | 13.33 | 9.96 |
Protein Annotations
| KEGG:00220+6.3.2.- | KEGG:00261+6.3.2.- | KEGG:00380+6.3.2.- | MapMan:19.2.2.1.5.3.2 | GO:A0A078ISL9 | UniProt:A0A078ISL9 |
| EnsemblPlants:CDY52033 | ProteinID:CDY52033 | ProteinID:CDY52033.1 | InterPro:GIDE | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004842 | GO:GO:0005575 | GO:GO:0006464 | GO:GO:0006996 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016567 | GO:GO:0016740 |
| GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00004738001 | PFAM:PF12483 | PANTHER:PTHR12183 | PANTHER:PTHR12183:SF18 | TMHMM:TMhelix |
| UniPathway:UPA00143 | UniParc:UPI0002545A8D | : | : | : | : |
Description
BnaA08g31460DBnaA08g31460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ISL9]
Coordinates
chrLK033048:+:62702..63808
Molecular Weight (calculated)
19919.3 Da
IEP (calculated)
4.270
GRAVY (calculated)
-0.187
Length
180 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCTETELGD DGSAWITKSH NFLFQVKRCP WYLEDSTGVV KVVGAEAADD FLDTLTPHLD MSLSEIFGSI VEPKQGSQTI FRASLDTGTS LTIIGEAARD
101: EAGNLTIQNT NEQPFRIFSG EGSFDKMVAN LKSNSEFYFF YSKIFGTIAF AIVVFKGVSF IRRVLRERAD NADSDDEETP
101: EAGNLTIQNT NEQPFRIFSG EGSFDKMVAN LKSNSEFYFF YSKIFGTIAF AIVVFKGVSF IRRVLRERAD NADSDDEETP
001: MFLLVWNSKP TSFYDLLKEK TTNLLVLVSG RVASATTFNS KDGDLLGVVF ENTVIFGQAL KVGTSLTFVG EAVRDKAGNL MIQKSKEQSL IVFSEESSFD
101: EMVNNMKSQS ELCVILAKIF GSIAVAIAVV YGVDYARKVL LPFVWKKKDL GDSSSQNGSS DSEDTDISDF
101: EMVNNMKSQS ELCVILAKIF GSIAVAIAVV YGVDYARKVL LPFVWKKKDL GDSSSQNGSS DSEDTDISDF
Arabidopsis Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: E3 Ubiquitin ligase (InterPro:IPR022170); Has 30201 Blast hits to 17322 proteins in 780 species: A /.../- 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT1G14688]
SUBAcon: [mitochondrion,plasma membrane,plastid,cytosol]
SUBAcon: [mitochondrion,plasma membrane,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.