Factsheet for GSMUA_Achr10P29640_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, extracellular

Predictor Summary:

extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 4
golgi 3
plastid 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, plastid
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P18450_001	Banana	endoplasmic reticulum, golgi	26.14	18.37
CDX70390	Canola	cytosol	12.86	16.94
Bra016685.1-P	Field mustard	cytosol	9.96	13.33
CDY52033	Canola	cytosol	9.96	13.33
CDY52031	Canola	mitochondrion	14.11	12.83
CDX84016	Canola	extracellular, mitochondrion, plasma membrane, plastid	13.28	12.12
Bra016684.1-P	Field mustard	plasma membrane, vacuole	14.11	11.89
AT1G14688.1	Thale cress	cytosol, mitochondrion, plasma membrane, plastid	8.3	11.76
CDX84015	Canola	cytosol	2.9	10.61
GSMUA_Achr9P07520_001	Banana	cytosol, mitochondrion, plastid, vacuole	2.49	9.09

Protein Annotations

MapMan:19.2.2.1.5.3.2	InterPro:GIDE	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005575
GO:GO:0006464	GO:GO:0006996	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016043	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr10G29640_001
EnsemblPlants:GSMUA_Achr10P29640_001	EnsemblPlants:GSMUA_Achr10T29640_001	UniProt:M0RMI8	PFAM:PF12483	PANTHER:PTHR12183	PANTHER:PTHR12183:SF18
TMHMM:TMhelix	UniParc:UPI00029696D7	:	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G29640_001]

Coordinates

chr10:+:32095974..32099558

Molecular Weight (calculated)

27055.0 Da

IEP (calculated)

6.499

GRAVY (calculated)

0.127

Length

241 amino acids

Sequence
(BLAST)

001: MTLLFAVNFN SLLSIKFSKK VEQHSLKHND AGCLIQALDT IEDVSCPLVL KSGVNFALAR MMELDVSMLL GLASEVFEES QQSLACGTLD YLRGRKMLGV
101: KRTERILPTG IALTAVGEVV DNYASDCDHR DFVIEYKNIW YFESCLQMYA YLLIAYTCIF LYLLIALKMM LDVGGRALLA FPKSNNTDML KSMSFLSISW
201: SDENGPCERL RRPKCAGLTA ARLYSDHRQK SYDPNVVSAV D

Best Arabidopsis Sequence Match ( AT1G63900.2 )
(BLAST)

001: MIPWGGVTCC LSAAALYLLG RSSGRDAEVL ETVTRVNQLK ELAQLLELDS KILPFIVAVS GRVGSETPIK CEHSGIRGVI VEETAEQHFL KHNETGSWVQ
101: DSALMLSMSK EVPWFLDDGT SRVHVMGARG ATGFALTVGS EVFEESGRSL VRGTLDYLQG LKMLGVKRIE RVLPTGIPLT IVGEAVKDDI GEFRIQKPDR
201: GPFYVSSKSL DQLISNLGKW SRLYKYASMG FTVLGVFLIT KHVIDSVLER RRRRQLQKRV LDAAAKRAEL ESEGIHW

Arabidopsis Description

SP1E3 ubiquitin-protein ligase SP1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7N4]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.