Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plasma membrane, plastid, cytosol
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 1
- golgi 1
- extracellular 1
- plastid 2
- cytosol 1
- mitochondrion 2
- plasma membrane 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX84015 | Canola | cytosol | 17.65 | 45.45 |
| CDY52031 | Canola | mitochondrion | 44.12 | 28.3 |
| Bra016685.1-P | Field mustard | cytosol | 28.82 | 27.22 |
| CDY52033 | Canola | cytosol | 28.82 | 27.22 |
| Bra016684.1-P | Field mustard | plasma membrane, vacuole | 42.94 | 25.52 |
| CDX84016 | Canola | extracellular, mitochondrion, plasma membrane, plastid | 39.41 | 25.38 |
| AT1G63900.1 | Thale cress | endoplasmic reticulum, golgi | 23.53 | 11.66 |
| AT1G59560.1 | Thale cress | endoplasmic reticulum, extracellular, golgi | 22.35 | 11.24 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane, plastid | 11.76 | 8.3 |
Protein Annotations
| MapMan:35.2 | EntrezGene:6241058 | ProteinID:AEE29207.1 | ArrayExpress:AT1G14688 | EnsemblPlantsGene:AT1G14688 | RefSeq:AT1G14688 |
| TAIR:AT1G14688 | RefSeq:AT1G14688-TAIR-G | EnsemblPlants:AT1G14688.1 | TAIR:AT1G14688.1 | Unigene:At.65495 | UniProt:F4HWA5 |
| InterPro:GIDE | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 | GO:GO:0005575 | GO:GO:0006464 |
| GO:GO:0006996 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016043 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0016874 | GO:GO:0019538 | RefSeq:NP_001117290.1 |
| PFAM:PF12483 | TMHMM:TMhelix | UniParc:UPI0001738FB9 | SEG:seg | : | : |
Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: E3 Ubiquitin ligase (InterPro:IPR022170); Has 30201 Blast hits to 17322 proteins in 780 species: A /.../- 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT1G14688]
Coordinates
chr1:-:5049526..5050983
Molecular Weight (calculated)
18584.2 Da
IEP (calculated)
4.633
GRAVY (calculated)
0.115
Length
170 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLLVWNSKP TSFYDLLKEK TTNLLVLVSG RVASATTFNS KDGDLLGVVF ENTVIFGQAL KVGTSLTFVG EAVRDKAGNL MIQKSKEQSL IVFSEESSFD
101: EMVNNMKSQS ELCVILAKIF GSIAVAIAVV YGVDYARKVL LPFVWKKKDL GDSSSQNGSS DSEDTDISDF
101: EMVNNMKSQS ELCVILAKIF GSIAVAIAVV YGVDYARKVL LPFVWKKKDL GDSSSQNGSS DSEDTDISDF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.