Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 6
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G02885.1 | Thale cress | extracellular | 79.17 | 78.35 |
| KRH73005 | Soybean | endoplasmic reticulum, extracellular | 64.58 | 63.92 |
| PGSC0003DMT400040585 | Potato | extracellular | 63.54 | 63.54 |
| KRH17367 | Soybean | endoplasmic reticulum, extracellular | 63.54 | 62.89 |
| Solyc11g011210.1.1 | Tomato | extracellular | 62.5 | 62.5 |
| Bra008162.1-P | Field mustard | extracellular | 55.21 | 52.48 |
| Bra019917.1-P | Field mustard | cytosol | 32.29 | 46.97 |
| Bra020281.1-P | Field mustard | extracellular | 39.58 | 43.68 |
| Bra023513.1-P | Field mustard | extracellular | 46.88 | 42.45 |
| Bra002526.1-P | Field mustard | extracellular | 39.58 | 41.3 |
| Bra002525.1-P | Field mustard | extracellular | 37.5 | 39.13 |
| Bra013115.1-P | Field mustard | extracellular | 36.46 | 33.02 |
| Bra039830.1-P | Field mustard | extracellular | 33.33 | 29.91 |
Protein Annotations
| EnsemblPlants:Bra021407.1 | EnsemblPlants:Bra021407.1-P | EnsemblPlantsGene:Bra021407 | GO:GO:0005575 | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0009408 | GO:GO:0009506 | GO:GO:0009628 | GO:GO:0009719 | GO:GO:0009751 | GO:GO:0010286 |
| InterPro:GASA | PANTHER:PTHR23201 | PANTHER:PTHR23201:SF24 | PFAM:PF02704 | SEG:seg | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI0002544CB5 | UniProt:M4DY11 | MapMan:11.10.2.1.1 | : | : |
Description
AT3G02885 (E=3e-024) GASA5 | GASA5 (GAST1 PROTEIN HOMOLOG 5)
Coordinates
chrA01:-:25317858..25318576
Molecular Weight (calculated)
10761.3 Da
IEP (calculated)
9.484
GRAVY (calculated)
-0.319
Length
96 amino acids
Sequence
(BLAST)
(BLAST)
1: MTNSIKYVLL FLTLLSLLSV SNLVQASRGG GRLHPQDCRP KCNYRCSATS HKKPCMFFCL KCCSKCLCVP SGTYGNKQNC PCYNNWKTKE GRSKCP
1: MANCIRRNAL FFLTLLFLLS VSNLVQAARG GGKLKPQQCN SKCSFRCSAT SHKKPCMFFC LKCCKKCLCV PPGTFGNKQT CPCYNNWKTK EGRPKCP
Arabidopsis Description
GASA5Gibberellin-regulated protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q84J95]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.