Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 6
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g011210.1.1 | Tomato | extracellular | 96.88 | 96.88 |
| KRH73005 | Soybean | endoplasmic reticulum, extracellular | 70.83 | 70.1 |
| KRH17367 | Soybean | endoplasmic reticulum, extracellular | 69.79 | 69.07 |
| Bra021407.1-P | Field mustard | extracellular | 63.54 | 63.54 |
| AT3G02885.1 | Thale cress | extracellular | 60.42 | 59.79 |
| PGSC0003DMT400019726 | Potato | extracellular | 60.42 | 50.88 |
| PGSC0003DMT400083077 | Potato | extracellular | 54.17 | 50.49 |
| PGSC0003DMT400050285 | Potato | extracellular | 54.17 | 50.0 |
| PGSC0003DMT400003089 | Potato | extracellular | 43.75 | 44.68 |
| PGSC0003DMT400066182 | Potato | extracellular | 38.54 | 41.57 |
| PGSC0003DMT400003086 | Potato | extracellular | 40.62 | 41.49 |
| PGSC0003DMT400055426 | Potato | extracellular | 37.5 | 40.91 |
| PGSC0003DMT400047535 | Potato | extracellular | 36.46 | 39.33 |
| PGSC0003DMT400037423 | Potato | extracellular | 35.42 | 38.64 |
Protein Annotations
| EntrezGene:102586248 | MapMan:11.10.2.1.1 | InterPro:GASA | GO:GO:0005575 | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0009408 | GO:GO:0009506 | GO:GO:0009628 | GO:GO:0009719 | GO:GO:0009751 | GO:GO:0010286 |
| UniProt:M1BA38 | PFAM:PF02704 | EnsemblPlantsGene:PGSC0003DMG402015689 | PGSC:PGSC0003DMG402015689 | EnsemblPlants:PGSC0003DMT400040585 | PANTHER:PTHR23201 |
| PANTHER:PTHR23201:SF24 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000295001D | RefSeq:XP_006364638.1 | SEG:seg |
Description
Protein RSI-1 [Source:PGSC_GENE;Acc:PGSC0003DMG402015689]
Coordinates
chr11:+:1716258..1717672
Molecular Weight (calculated)
10866.5 Da
IEP (calculated)
9.258
GRAVY (calculated)
-0.237
Length
96 amino acids
Sequence
(BLAST)
(BLAST)
1: MAKSGYNASF LLLLSMFLIL LTFSNVVEGY NKLRPRDCKP KCTYRCSATS HKKPCMFFCQ KCCATCLCVP KGVYGNKQSC PCYNNWKTQE GKPKCP
1: MANCIRRNAL FFLTLLFLLS VSNLVQAARG GGKLKPQQCN SKCSFRCSAT SHKKPCMFFC LKCCKKCLCV PPGTFGNKQT CPCYNNWKTK EGRPKCP
Arabidopsis Description
GASA5Gibberellin-regulated protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q84J95]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.