Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g005620.2.1 | Tomato | extracellular | 97.75 | 97.75 |
| GSMUA_Achr6P07810_001 | Banana | cytosol | 35.96 | 68.09 |
| PGSC0003DMT400055426 | Potato | extracellular | 64.04 | 64.77 |
| PGSC0003DMT400037423 | Potato | extracellular | 62.92 | 63.64 |
| PGSC0003DMT400066182 | Potato | extracellular | 62.92 | 62.92 |
| GSMUA_Achr6P02260_001 | Banana | extracellular | 60.67 | 59.34 |
| GSMUA_Achr10P... | Banana | extracellular | 60.67 | 58.7 |
| GSMUA_Achr10P... | Banana | extracellular | 59.55 | 58.24 |
| GSMUA_Achr6P11160_001 | Banana | extracellular | 57.3 | 56.04 |
| TraesCS5D01G408000.1 | Wheat | extracellular | 58.43 | 55.32 |
| TraesCS5A01G398500.1 | Wheat | extracellular | 57.3 | 54.26 |
| TraesCS5B01G403500.1 | Wheat | extracellular | 57.3 | 54.26 |
| CDY50148 | Canola | extracellular | 58.43 | 54.17 |
| TraesCS5A01G398600.1 | Wheat | endoplasmic reticulum, extracellular | 58.43 | 54.17 |
| GSMUA_Achr5P16080_001 | Banana | extracellular | 47.19 | 53.85 |
| Os03t0760800-01 | Rice | extracellular | 53.93 | 51.61 |
| EER90847 | Sorghum | extracellular | 53.93 | 51.61 |
| TraesCS5A01G398700.1 | Wheat | endoplasmic reticulum, extracellular | 56.18 | 51.02 |
| TraesCS5B01G403600.1 | Wheat | endoplasmic reticulum, extracellular | 56.18 | 51.02 |
| TraesCS5D01G408100.1 | Wheat | endoplasmic reticulum, extracellular | 56.18 | 51.02 |
| Zm00001d013222_P001 | Maize | extracellular | 53.93 | 50.0 |
| AT2G14900.1 | Thale cress | extracellular | 58.43 | 48.15 |
| CDY22975 | Canola | extracellular | 51.69 | 47.42 |
| Bra013115.1-P | Field mustard | extracellular | 55.06 | 46.23 |
| CDX93153 | Canola | extracellular | 55.06 | 46.23 |
| CDX89647 | Canola | extracellular | 55.06 | 46.23 |
| Bra039830.1-P | Field mustard | extracellular | 55.06 | 45.79 |
| VIT_07s0129g00580.t01 | Wine grape | extracellular | 65.17 | 45.67 |
| CDY52417 | Canola | extracellular | 55.06 | 45.37 |
| CDY54472 | Canola | extracellular | 55.06 | 44.95 |
| PGSC0003DMT400003089 | Potato | extracellular | 40.45 | 38.3 |
| PGSC0003DMT400003086 | Potato | extracellular | 39.33 | 37.23 |
| PGSC0003DMT400040585 | Potato | extracellular | 39.33 | 36.46 |
| PGSC0003DMT400083077 | Potato | extracellular | 35.96 | 31.07 |
| PGSC0003DMT400050285 | Potato | extracellular | 35.96 | 30.77 |
| PGSC0003DMT400019726 | Potato | extracellular | 38.2 | 29.82 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400047535 | EnsemblPlantsGene:PGSC0003DMG400018474 | EntrezGene:102599226 | InterPro:GASA | PANTHER:PTHR23201 | PANTHER:PTHR23201:SF10 |
| PFAM:PF02704 | PGSC:PGSC0003DMG400018474 | RefSeq:XP_006361222.1 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000295D1A9 |
| UniProt:M1BKY3 | MapMan:11.10.2.1.1 | : | : | : | : |
Description
GAST1 protein [Source:PGSC_GENE;Acc:PGSC0003DMG400018474]
Coordinates
chr8:-:3486884..3487733
Molecular Weight (calculated)
9757.0 Da
IEP (calculated)
8.955
GRAVY (calculated)
0.027
Length
89 amino acids
Sequence
(BLAST)
(BLAST)
1: MKTSFAVLFL VVILFSSSFI ENAAMATSSY CDQKCSARCW KAGLKKRCLK YCGICCVACN CVPSGTYGNK SECPCYRDKL NSKGKPKCP
001: MKIIVSILVL ASLLLISSSL ASATISDAFG SGAVAPAPQS KDGPALEKWC GQKCEGRCKE AGMKDRCLKY CGICCKDCQC VPSGTYGNKH ECACYRDKLS
101: SKGTPKCP
101: SKGTPKCP
Arabidopsis Description
GASA7Gibberellin-regulated protein 7 [Source:UniProtKB/Swiss-Prot;Acc:O82328]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.