Factsheet for TraesCS5A01G398500.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G403500.1	Wheat	extracellular	94.68	94.68
TraesCS5A01G398600.1	Wheat	endoplasmic reticulum, extracellular	90.43	88.54
Os03t0760800-01	Rice	extracellular	85.11	86.02
EER90847	Sorghum	extracellular	84.04	84.95
TraesCS5A01G398700.1	Wheat	endoplasmic reticulum, extracellular	82.98	79.59
Zm00001d013222_P001	Maize	extracellular	80.85	79.17
Solyc04g078200.2.1	Tomato	extracellular	48.94	70.77
Solyc12g042500.1.1	Tomato	extracellular	62.77	67.05
GSMUA_Achr6P11160_001	Banana	extracellular	64.89	67.03
GSMUA_Achr6P02260_001	Banana	extracellular	63.83	65.93
PGSC0003DMT400037423	Potato	extracellular	61.7	65.91
GSMUA_Achr10P...	Banana	extracellular	62.77	64.84
Bra019917.1-P	Field mustard	cytosol	44.68	63.64
Solyc12g042520.1.1	Tomato	extracellular	59.57	63.64
VIT_18s0001g09460.t01	Wine grape	extracellular	57.45	61.36
CDY20958	Canola	extracellular	56.38	60.23
CDY20617	Canola	extracellular	56.38	60.23
KRH52061	Soybean	extracellular	56.38	60.23
PGSC0003DMT400055426	Potato	extracellular	56.38	60.23
GSMUA_Achr10P...	Banana	extracellular	58.51	59.78
VIT_03s0091g00390.t01	Wine grape	extracellular	55.32	59.09
KRH35705	Soybean	extracellular	56.38	58.89
KRG91068	Soybean	extracellular	56.38	58.89
AT2G39540.1	Thale cress	extracellular	54.26	58.62
AT5G59845.1	Thale cress	extracellular	55.32	58.43
PGSC0003DMT400047535	Potato	extracellular	54.26	57.3
CDX88727	Canola	extracellular	55.32	57.14
CDX71072	Canola	extracellular	55.32	57.14
CDY72009	Canola	extracellular	53.19	56.82
KRH05612	Soybean	extracellular	53.19	56.82
CDX80223	Canola	extracellular	55.32	56.52
Bra002526.1-P	Field mustard	extracellular	55.32	56.52
CDY31591	Canola	extracellular	55.32	56.52
Bra020281.1-P	Field mustard	extracellular	52.13	56.32
Solyc08g005620.2.1	Tomato	extracellular	53.19	56.18
KRH15429	Soybean	extracellular	52.13	55.68
Bra002525.1-P	Field mustard	extracellular	54.26	55.43
CDY31590	Canola	extracellular	54.26	55.43
CDX80222	Canola	extracellular	54.26	55.43
PGSC0003DMT400066182	Potato	extracellular	52.13	55.06
Solyc01g107370.2.1	Tomato	extracellular	52.13	55.06
CDY09248	Canola	extracellular	52.13	55.06
AT1G10588.1	Thale cress	extracellular	52.13	54.44
CDX93402	Canola	endoplasmic reticulum, extracellular	52.13	52.13
CDX89647	Canola	extracellular	53.19	47.17
CDX93153	Canola	extracellular	53.19	47.17
Bra013115.1-P	Field mustard	extracellular	53.19	47.17
TraesCS1A01G381700.1	Wheat	cytosol	38.3	46.15
CDY50148	Canola	extracellular	46.81	45.83
AT2G14900.1	Thale cress	extracellular	52.13	45.37
Bra039830.1-P	Field mustard	extracellular	51.06	44.86
CDY22975	Canola	extracellular	45.74	44.33
CDY54472	Canola	extracellular	51.06	44.04
CDY52417	Canola	extracellular	50.0	43.52
VIT_07s0129g00580.t01	Wine grape	extracellular	58.51	43.31
TraesCS1A01G381600.1	Wheat	extracellular	43.62	39.81
TraesCS7A01G208100.1	Wheat	extracellular	40.43	37.62
TraesCS5A01G227000.1	Wheat	extracellular	37.23	31.25

Protein Annotations

EnsemblPlants:TraesCS5A01G398500.1	EnsemblPlantsGene:TraesCS5A01G398500	InterPro:GASA	PANTHER:PTHR23201	PANTHER:PTHR23201:SF10	PFAM:PF02704
SEG:seg	SignalP:SignalP-noTM	TMHMM:TMhelix	MapMan:11.10.2.1.1	:	:

Description

No Description!

Coordinates

chr5A:-:592302499..592302890

Molecular Weight (calculated)

9785.9 Da

IEP (calculated)

8.563

GRAVY (calculated)

-0.115

Length

94 amino acids

Sequence
(BLAST)

1: MKLGPTATTV ALLLVLLLAS SSLRAATAGS AFCDGKCGVR CSKASRHDDC LKYCGICCAE CNCVPSGTAG NKDECPCYRD KTTGHGARKR PKCP

Best Arabidopsis Sequence Match ( AT2G39540.1 )
(BLAST)

1: MKLVVVQFFI ISLLLTSSFS VLSSADSSCG GKCNVRCSKA GQHEECLKYC NICCQKCNCV PSGTFGHKDE CPCYRDMKNS KGGSKCP

Arabidopsis Description

Gibberellin-regulated protein 8 [Source:UniProtKB/Swiss-Prot;Acc:O80641]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.