Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 6
- golgi 5
- plastid 3
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_03s0091g00390.t01 | Wine grape | extracellular | 52.76 | 76.14 |
| GSMUA_Achr6P07810_001 | Banana | cytosol | 26.77 | 72.34 |
| VIT_18s0001g09460.t01 | Wine grape | extracellular | 48.82 | 70.45 |
| Solyc08g005620.2.1 | Tomato | extracellular | 46.46 | 66.29 |
| PGSC0003DMT400047535 | Potato | extracellular | 45.67 | 65.17 |
| GSMUA_Achr5P16080_001 | Banana | extracellular | 37.8 | 61.54 |
| TraesCS5D01G408000.1 | Wheat | extracellular | 44.09 | 59.57 |
| GSMUA_Achr6P11160_001 | Banana | extracellular | 42.52 | 59.34 |
| TraesCS5A01G398500.1 | Wheat | extracellular | 43.31 | 58.51 |
| TraesCS5B01G403500.1 | Wheat | extracellular | 43.31 | 58.51 |
| GSMUA_Achr10P... | Banana | extracellular | 41.73 | 58.24 |
| GSMUA_Achr10P... | Banana | extracellular | 41.73 | 57.61 |
| TraesCS5A01G398600.1 | Wheat | endoplasmic reticulum, extracellular | 43.31 | 57.29 |
| GSMUA_Achr6P02260_001 | Banana | extracellular | 40.94 | 57.14 |
| TraesCS5D01G408100.1 | Wheat | endoplasmic reticulum, extracellular | 43.31 | 56.12 |
| Os03t0760800-01 | Rice | extracellular | 40.94 | 55.91 |
| TraesCS5B01G403600.1 | Wheat | endoplasmic reticulum, extracellular | 42.52 | 55.1 |
| EER90847 | Sorghum | extracellular | 40.16 | 54.84 |
| TraesCS5A01G398700.1 | Wheat | endoplasmic reticulum, extracellular | 41.73 | 54.08 |
| Zm00001d013222_P001 | Maize | extracellular | 40.16 | 53.12 |
| CDY50148 | Canola | extracellular | 40.16 | 53.12 |
| CDX93153 | Canola | extracellular | 44.09 | 52.83 |
| CDX89647 | Canola | extracellular | 44.09 | 52.83 |
| Bra013115.1-P | Field mustard | extracellular | 44.09 | 52.83 |
| CDY22975 | Canola | extracellular | 39.37 | 51.55 |
| AT2G14900.1 | Thale cress | extracellular | 43.31 | 50.93 |
| Bra039830.1-P | Field mustard | extracellular | 41.73 | 49.53 |
| CDY54472 | Canola | extracellular | 41.73 | 48.62 |
| CDY52417 | Canola | extracellular | 40.94 | 48.15 |
| VIT_00s0189g00060.t01 | Wine grape | cytosol, extracellular, nucleus | 22.83 | 45.31 |
| VIT_00s0189g00070.t01 | Wine grape | endoplasmic reticulum, extracellular | 28.35 | 41.38 |
| VIT_08s0007g05860.t01 | Wine grape | extracellular | 28.35 | 31.58 |
| VIT_14s0108g00740.t01 | Wine grape | extracellular | 25.98 | 31.13 |
| VIT_17s0000g06210.t01 | Wine grape | extracellular | 25.2 | 30.77 |
Protein Annotations
| ArrayExpress:VIT_07s0129g00580 | EMBL:FN596246 | EnsemblPlants:VIT_07s0129g00580.t01 | EnsemblPlantsGene:VIT_07s0129g00580 | EntrezGene:100252558 | EntrezGene:LOC100252558 |
| InterPro:GASA | PANTHER:PTHR23201 | PANTHER:PTHR23201:SF10 | PFAM:PF02704 | ProteinID:CCB57768 | ProteinID:CCB57768.1 |
| RefSeq:XP_002283986 | RefSeq:XP_002283986.1 | SEG:seg | SignalP:SignalP-noTM | TIGR:TC63330 | unigene:Vvi.17254 |
| UniParc:UPI00019839E0 | UniProt:F6HSV8 | wikigene:100252558 | wikigene:LOC100252558 | MapMan:11.10.2.1.1 | : |
Description
No Description!
Coordinates
chr7:+:15821789..15822643
Molecular Weight (calculated)
13441.7 Da
IEP (calculated)
9.270
GRAVY (calculated)
-0.282
Length
127 amino acids
Sequence
(BLAST)
(BLAST)
001: MKQLAFPTLL LVSLLLSSIF LQPTVAGPPT TAAPPTKPVQ PTKPAPPTKP SPPTKPAPPT MPAPMKGFCD SKCGVRCANA GVYDRCVKYC GICCQECKCV
101: PSGTYGNKSE CPCYRDKLNS KGKPKCP
101: PSGTYGNKSE CPCYRDKLNS KGKPKCP
001: MKIIVSILVL ASLLLISSSL ASATISDAFG SGAVAPAPQS KDGPALEKWC GQKCEGRCKE AGMKDRCLKY CGICCKDCQC VPSGTYGNKH ECACYRDKLS
101: SKGTPKCP
101: SKGTPKCP
Arabidopsis Description
GASA7Gibberellin-regulated protein 7 [Source:UniProtKB/Swiss-Prot;Acc:O82328]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.