Factsheet for Os03t0760800-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 6
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular, golgi, nucleus, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

extracellular: 16905871

extracellular: 19038476
extracellular: 24083427

gfp PMID: 16905871

T Furukawa, N Sakaguchi, H Shimada

Division of Plant Biotechnology, Tissue Engineering Research Center, Tokyo University of Science, Chiba-ken, Japan.

msms PMID: 24083427 doi

T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu

Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.

msms PMID: 19038476 doi

XY Chen, ST Kim, WK Cho, Y Rim, S Kim, SW Kim, KY Kang, ZY Park, JY Kim

Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju 660-701, Republic of Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G398500.1	Wheat	extracellular	86.02	85.11
EER90847	Sorghum	extracellular	84.95	84.95
TraesCS5D01G408000.1	Wheat	extracellular	84.95	84.04
TraesCS5B01G403500.1	Wheat	extracellular	84.95	84.04
TraesCS5B01G403600.1	Wheat	endoplasmic reticulum, extracellular	87.1	82.65
TraesCS5D01G408100.1	Wheat	endoplasmic reticulum, extracellular	86.02	81.63
TraesCS5A01G398600.1	Wheat	endoplasmic reticulum, extracellular	82.8	80.21
Zm00001d013222_P001	Maize	extracellular	81.72	79.17
TraesCS5A01G398700.1	Wheat	endoplasmic reticulum, extracellular	81.72	77.55
Solyc04g078200.2.1	Tomato	extracellular	48.39	69.23
GSMUA_Achr6P11160_001	Banana	extracellular	66.67	68.13
GSMUA_Achr6P02260_001	Banana	extracellular	65.59	67.03
GSMUA_Achr10P...	Banana	extracellular	64.52	65.93
Bra019917.1-P	Field mustard	cytosol	45.16	63.64
PGSC0003DMT400037423	Potato	extracellular	60.22	63.64
GSMUA_Achr10P...	Banana	extracellular	62.37	63.04
Solyc12g042500.1.1	Tomato	extracellular	59.14	62.5
KRH52061	Soybean	extracellular	59.14	62.5
Solyc12g042520.1.1	Tomato	extracellular	56.99	60.23
PGSC0003DMT400055426	Potato	extracellular	56.99	60.23
AT2G39540.1	Thale cress	extracellular	55.91	59.77
VIT_18s0001g09460.t01	Wine grape	extracellular	55.91	59.09
CDY20617	Canola	extracellular	55.91	59.09
CDY20958	Canola	extracellular	55.91	59.09
KRH05612	Soybean	extracellular	55.91	59.09
AT5G59845.1	Thale cress	extracellular	55.91	58.43
CDX88727	Canola	extracellular	56.99	58.24
CDX71072	Canola	extracellular	56.99	58.24
KRH15429	Soybean	extracellular	54.84	57.95
Bra002525.1-P	Field mustard	extracellular	56.99	57.61
Bra002526.1-P	Field mustard	extracellular	56.99	57.61
CDY31591	Canola	extracellular	56.99	57.61
Bra020281.1-P	Field mustard	extracellular	53.76	57.47
CDX80223	Canola	extracellular	55.91	56.52
CDX80222	Canola	extracellular	55.91	56.52
CDY31590	Canola	extracellular	55.91	56.52
CDY09248	Canola	extracellular	53.76	56.18
CDY72009	Canola	extracellular	52.69	55.68
VIT_03s0091g00390.t01	Wine grape	extracellular	52.69	55.68
AT1G10588.1	Thale cress	extracellular	53.76	55.56
KRG91068	Soybean	extracellular	53.76	55.56
KRH35705	Soybean	extracellular	53.76	55.56
PGSC0003DMT400066182	Potato	extracellular	52.69	55.06
Solyc01g107370.2.1	Tomato	extracellular	52.69	55.06
PGSC0003DMT400047535	Potato	extracellular	51.61	53.93
Solyc08g005620.2.1	Tomato	extracellular	50.54	52.81
CDX93402	Canola	endoplasmic reticulum, extracellular	52.69	52.13
Os10t0115550-00	Rice	endoplasmic reticulum, extracellular	38.71	50.7
Bra013115.1-P	Field mustard	extracellular	49.46	43.4
CDX89647	Canola	extracellular	49.46	43.4
CDX93153	Canola	extracellular	49.46	43.4
CDY22975	Canola	extracellular	45.16	43.3
CDY50148	Canola	extracellular	43.01	41.67
AT2G14900.1	Thale cress	extracellular	48.39	41.67
Bra039830.1-P	Field mustard	extracellular	47.31	41.12
VIT_07s0129g00580.t01	Wine grape	extracellular	55.91	40.94
CDY54472	Canola	extracellular	47.31	40.37
CDY52417	Canola	extracellular	46.24	39.81
Os06t0266800-02	Rice	extracellular	40.86	34.55
Os09t0414900-01	Rice	extracellular	38.71	32.14
Os05t0376800-01	Rice	extracellular	38.71	23.68

Protein Annotations

EMBL:AB192574	EMBL:AK121316	EnsemblPlants:Os03t0760800-01	EnsemblPlantsGene:Os03g0760800	EntrezGene:4334189	InterPro:GASA
PANTHER:PTHR23201	PANTHER:PTHR23201:SF10	PFAM:PF02704	ProteinID:AAK63933.1	ProteinID:ABF99002.1	ProteinID:BAF13262.1
ProteinID:BAS86504.1	ProteinID:EAZ28663.1	RefSeq:XP_015629016.1	SEG:seg	SignalP:SignalP-noTM	UniParc:UPI000004A1D3
UniProt:Q94HA1	MapMan:11.10.2.1.1	:	:	:	:

Description

GA Stimulated Rice 1, GA-stimulated transcript-related gene 1A member of the GAST (gibberellin (GA)-Stimulated Transcript) family, Control of seedling growth and α-amylase expression, Cell proliferation in meristems and panicles development (Os03t0760800-01)

Coordinates

chr3:-:31464821..31465623

Molecular Weight (calculated)

9912.1 Da

IEP (calculated)

8.433

GRAVY (calculated)

-0.138

Length

93 amino acids

Sequence
(BLAST)

1: MKLNTTTTLA LLLLLLLASS SLQVSMAGSD FCDGKCKVRC SKASRHDDCL KYCGVCCASC NCVPSGTAGN KDECPCYRDM TTGHGARKRP KCP

Best Arabidopsis Sequence Match ( AT2G39540.1 )
(BLAST)

1: MKLVVVQFFI ISLLLTSSFS VLSSADSSCG GKCNVRCSKA GQHEECLKYC NICCQKCNCV PSGTFGHKDE CPCYRDMKNS KGGSKCP

Arabidopsis Description

Gibberellin-regulated protein 8 [Source:UniProtKB/Swiss-Prot;Acc:O80641]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.