Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 8
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020281.1-P | Field mustard | extracellular | 78.65 | 80.46 |
| CDY31591 | Canola | extracellular | 82.02 | 79.35 |
| CDY09248 | Canola | extracellular | 78.65 | 78.65 |
| Bra002526.1-P | Field mustard | extracellular | 80.9 | 78.26 |
| CDX80222 | Canola | extracellular | 79.78 | 77.17 |
| CDX80223 | Canola | extracellular | 79.78 | 77.17 |
| AT2G39540.1 | Thale cress | extracellular | 75.28 | 77.01 |
| CDX71072 | Canola | extracellular | 78.65 | 76.92 |
| CDX88727 | Canola | extracellular | 78.65 | 76.92 |
| CDY31590 | Canola | extracellular | 78.65 | 76.09 |
| Bra002525.1-P | Field mustard | extracellular | 78.65 | 76.09 |
| GSMUA_Achr6P07810_001 | Banana | cytosol | 38.2 | 72.34 |
| AT1G10588.1 | Thale cress | extracellular | 71.91 | 71.11 |
| VIT_03s0091g00390.t01 | Wine grape | extracellular | 57.3 | 57.95 |
| KRG91068 | Soybean | extracellular | 58.43 | 57.78 |
| KRH35705 | Soybean | extracellular | 58.43 | 57.78 |
| GSMUA_Achr6P02260_001 | Banana | extracellular | 58.43 | 57.14 |
| GSMUA_Achr10P... | Banana | extracellular | 57.3 | 56.04 |
| Os03t0760800-01 | Rice | extracellular | 58.43 | 55.91 |
| TraesCS5A01G398500.1 | Wheat | extracellular | 58.43 | 55.32 |
| TraesCS5D01G408000.1 | Wheat | extracellular | 58.43 | 55.32 |
| GSMUA_Achr5P16080_001 | Banana | extracellular | 48.31 | 55.13 |
| TraesCS5B01G403500.1 | Wheat | extracellular | 57.3 | 54.26 |
| Zm00001d013222_P001 | Maize | extracellular | 58.43 | 54.17 |
| GSMUA_Achr6P11160_001 | Banana | extracellular | 55.06 | 53.85 |
| EER90847 | Sorghum | extracellular | 56.18 | 53.76 |
| GSMUA_Achr10P... | Banana | extracellular | 55.06 | 53.26 |
| TraesCS5A01G398600.1 | Wheat | endoplasmic reticulum, extracellular | 56.18 | 52.08 |
| TraesCS5B01G403600.1 | Wheat | endoplasmic reticulum, extracellular | 53.93 | 48.98 |
| TraesCS5A01G398700.1 | Wheat | endoplasmic reticulum, extracellular | 52.81 | 47.96 |
| TraesCS5D01G408100.1 | Wheat | endoplasmic reticulum, extracellular | 52.81 | 47.96 |
| AT2G14900.1 | Thale cress | extracellular | 56.18 | 46.3 |
| AT1G74670.1 | Thale cress | extracellular | 41.57 | 36.63 |
| AT3G02885.1 | Thale cress | extracellular | 39.33 | 36.08 |
| AT2G30810.1 | Thale cress | extracellular | 42.7 | 35.85 |
| AT3G10185.1 | Thale cress | endoplasmic reticulum, extracellular | 42.7 | 31.15 |
| AT5G15230.1 | Thale cress | extracellular | 35.96 | 30.19 |
Protein Annotations
| MapMan:11.10.2.1.1 | EntrezGene:836106 | UniProt:A0A178ULB2 | ProteinID:AED97241.1 | EMBL:AK118173 | EMBL:AK228548 |
| ArrayExpress:AT5G59845 | EnsemblPlantsGene:AT5G59845 | RefSeq:AT5G59845 | TAIR:AT5G59845 | RefSeq:AT5G59845-TAIR-G | EnsemblPlants:AT5G59845.1 |
| TAIR:AT5G59845.1 | EMBL:AY084760 | ProteinID:BAB08352.1 | InterPro:GASA | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0005618 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009505 | GO:GO:0009719 | GO:GO:0009740 | GO:GO:0009987 | GO:GO:0030312 |
| RefSeq:NP_568914.1 | ProteinID:OAO94107.1 | PFAM:PF02704 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR23201 | PANTHER:PTHR23201:SF10 | UniProt:Q8LFM2 | SignalP:SignalP-noTM |
| UniParc:UPI000005EC30 | SEG:seg | : | : | : | : |
Description
GASA10Gibberellin-regulated protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFM2]
Coordinates
chr5:+:24111304..24112100
Molecular Weight (calculated)
9747.0 Da
IEP (calculated)
8.681
GRAVY (calculated)
-0.208
Length
89 amino acids
Sequence
(BLAST)
(BLAST)
1: MKFPAVKVLI ISLLITSSLF ILSTADSSPC GGKCNVRCSK AGRQDRCLKY CNICCEKCNY CVPSGTYGNK DECPCYRDMK NSKGTSKCP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.