Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 8
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY14668 | Canola | cytosol | 57.55 | 82.43 |
| GSMUA_Achr11P... | Banana | cytosol | 55.66 | 80.82 |
| CDY27104 | Canola | extracellular | 79.25 | 80.0 |
| VIT_00s0189g00060.t01 | Wine grape | cytosol, extracellular, nucleus | 42.45 | 70.31 |
| KRG97330 | Soybean | extracellular | 55.66 | 64.13 |
| KRH18123 | Soybean | extracellular | 55.66 | 63.44 |
| KRH18120 | Soybean | extracellular | 55.66 | 63.44 |
| Os10t0115550-00 | Rice | endoplasmic reticulum, extracellular | 41.51 | 61.97 |
| TraesCS1A01G381700.1 | Wheat | cytosol | 44.34 | 60.26 |
| VIT_00s0189g00070.t01 | Wine grape | endoplasmic reticulum, extracellular | 47.17 | 57.47 |
| Zm00001d030236_P001 | Maize | extracellular | 55.66 | 56.19 |
| KXG38749 | Sorghum | extracellular | 55.66 | 56.19 |
| AT3G02885.1 | Thale cress | extracellular | 50.94 | 55.67 |
| Solyc06g007920.1.1 | Tomato | cytosol | 43.4 | 54.76 |
| TraesCS1D01G389400.1 | Wheat | extracellular | 50.0 | 51.46 |
| TraesCS1A01G381600.1 | Wheat | extracellular | 50.0 | 51.46 |
| AT1G74670.1 | Thale cress | extracellular | 48.11 | 50.49 |
| TraesCS1B01G404100.1 | Wheat | extracellular | 48.11 | 49.51 |
| AT2G39540.1 | Thale cress | extracellular | 38.68 | 47.13 |
| HORVU1Hr1G084230.1 | Barley | extracellular | 50.0 | 46.9 |
| AT5G15230.1 | Thale cress | extracellular | 45.28 | 45.28 |
| AT1G10588.1 | Thale cress | extracellular | 37.74 | 44.44 |
| Solyc06g007910.2.1 | Tomato | extracellular, nucleus | 38.68 | 43.62 |
| PGSC0003DMT400003089 | Potato | extracellular | 38.68 | 43.62 |
| AT3G10185.1 | Thale cress | endoplasmic reticulum, extracellular | 50.0 | 43.44 |
| AT5G59845.1 | Thale cress | extracellular | 35.85 | 42.7 |
| PGSC0003DMT400003086 | Potato | extracellular | 37.74 | 42.55 |
| Solyc06g007890.2.1 | Tomato | extracellular | 36.79 | 41.49 |
| AT2G14900.1 | Thale cress | extracellular | 34.91 | 34.26 |
Protein Annotations
| MapMan:11.10.2.1.1 | EntrezGene:817632 | ProteinID:AAC20716.1 | ProteinID:AEC08443.1 | ArrayExpress:AT2G30810 | EnsemblPlantsGene:AT2G30810 |
| RefSeq:AT2G30810 | TAIR:AT2G30810 | RefSeq:AT2G30810-TAIR-G | EnsemblPlants:AT2G30810.1 | TAIR:AT2G30810.1 | Unigene:At.38312 |
| EMBL:BT014937 | EMBL:BT015386 | InterPro:GASA | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009740 | GO:GO:0009987 | RefSeq:NP_180639.2 |
| PFAM:PF02704 | PO:PO:0009047 | PANTHER:PTHR23201 | PANTHER:PTHR23201:SF1 | UniProt:Q6GKX7 | SignalP:SignalP-noTM |
| UniParc:UPI00002431F3 | SEG:seg | : | : | : | : |
Description
GASA12Gibberellin-regulated protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q6GKX7]
Coordinates
chr2:-:13127826..13128666
Molecular Weight (calculated)
11672.0 Da
IEP (calculated)
7.797
GRAVY (calculated)
-0.371
Length
106 amino acids
Sequence
(BLAST)
(BLAST)
001: MMKLIVVFVI SSLLFATQFS NGDELESQAQ APAIHKNGGE GSLKPEECPK ACEYRCSATS HRKPCLFFCN KCCNKCLCVP SGTYGHKEEC PCYNNWTTKE
101: GGPKCP
101: GGPKCP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.