Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 8
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039830.1-P | Field mustard | extracellular | 81.48 | 82.24 |
| Bra013115.1-P | Field mustard | extracellular | 79.63 | 81.13 |
| CDY54472 | Canola | extracellular | 81.48 | 80.73 |
| CDY52417 | Canola | extracellular | 80.56 | 80.56 |
| CDX93153 | Canola | extracellular | 78.7 | 80.19 |
| CDX89647 | Canola | extracellular | 78.7 | 80.19 |
| GSMUA_Achr6P07810_001 | Banana | cytosol | 28.7 | 65.96 |
| PGSC0003DMT400047535 | Potato | extracellular | 48.15 | 58.43 |
| Solyc08g005620.2.1 | Tomato | extracellular | 47.22 | 57.3 |
| AT5G59845.1 | Thale cress | extracellular | 46.3 | 56.18 |
| GSMUA_Achr10P... | Banana | extracellular | 47.22 | 56.04 |
| GSMUA_Achr6P11160_001 | Banana | extracellular | 47.22 | 56.04 |
| TraesCS5D01G408000.1 | Wheat | extracellular | 46.3 | 53.19 |
| AT2G39540.1 | Thale cress | extracellular | 42.59 | 52.87 |
| TraesCS5B01G403500.1 | Wheat | extracellular | 45.37 | 52.13 |
| TraesCS5A01G398500.1 | Wheat | extracellular | 45.37 | 52.13 |
| TraesCS5A01G398600.1 | Wheat | endoplasmic reticulum, extracellular | 46.3 | 52.08 |
| GSMUA_Achr6P02260_001 | Banana | extracellular | 43.52 | 51.65 |
| GSMUA_Achr10P... | Banana | extracellular | 43.52 | 51.09 |
| AT1G10588.1 | Thale cress | extracellular | 41.67 | 50.0 |
| GSMUA_Achr5P16080_001 | Banana | extracellular | 35.19 | 48.72 |
| Os03t0760800-01 | Rice | extracellular | 41.67 | 48.39 |
| EER90847 | Sorghum | extracellular | 40.74 | 47.31 |
| TraesCS5B01G403600.1 | Wheat | endoplasmic reticulum, extracellular | 42.59 | 46.94 |
| TraesCS5D01G408100.1 | Wheat | endoplasmic reticulum, extracellular | 42.59 | 46.94 |
| TraesCS5A01G398700.1 | Wheat | endoplasmic reticulum, extracellular | 41.67 | 45.92 |
| Zm00001d013222_P001 | Maize | extracellular | 40.74 | 45.83 |
| VIT_07s0129g00580.t01 | Wine grape | extracellular | 50.93 | 43.31 |
| AT3G02885.1 | Thale cress | extracellular | 32.41 | 36.08 |
| AT2G30810.1 | Thale cress | extracellular | 34.26 | 34.91 |
| AT3G10185.1 | Thale cress | endoplasmic reticulum, extracellular | 35.19 | 31.15 |
| AT1G74670.1 | Thale cress | extracellular | 28.7 | 30.69 |
| AT5G15230.1 | Thale cress | extracellular | 28.7 | 29.25 |
Protein Annotations
| MapMan:11.10.2.1.1 | EntrezGene:815979 | UniProt:A0A178VLB4 | ProteinID:AAC61287.1 | ProteinID:AEC06348.1 | ArrayExpress:AT2G14900 |
| EnsemblPlantsGene:AT2G14900 | RefSeq:AT2G14900 | TAIR:AT2G14900 | RefSeq:AT2G14900-TAIR-G | EnsemblPlants:AT2G14900.1 | TAIR:AT2G14900.1 |
| Unigene:At.40482 | EMBL:BT002904 | EMBL:BT004423 | InterPro:GASA | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009740 | GO:GO:0009987 |
| RefSeq:NP_179096.1 | UniProt:O82328 | ProteinID:OAP07187.1 | PFAM:PF02704 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR23201 |
| PANTHER:PTHR23201:SF10 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000000BE2C | SEG:seg | : |
Description
GASA7Gibberellin-regulated protein 7 [Source:UniProtKB/Swiss-Prot;Acc:O82328]
Coordinates
chr2:+:6404131..6405352
Molecular Weight (calculated)
11381.9 Da
IEP (calculated)
8.427
GRAVY (calculated)
-0.060
Length
108 amino acids
Sequence
(BLAST)
(BLAST)
001: MKIIVSILVL ASLLLISSSL ASATISDAFG SGAVAPAPQS KDGPALEKWC GQKCEGRCKE AGMKDRCLKY CGICCKDCQC VPSGTYGNKH ECACYRDKLS
101: SKGTPKCP
101: SKGTPKCP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.