Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G408100.1 | Wheat | endoplasmic reticulum, extracellular | 97.96 | 97.96 |
| TraesCS5A01G398700.1 | Wheat | endoplasmic reticulum, extracellular | 94.9 | 94.9 |
| TraesCS5B01G403500.1 | Wheat | extracellular | 84.69 | 88.3 |
| Os03t0760800-01 | Rice | extracellular | 82.65 | 87.1 |
| EER90847 | Sorghum | extracellular | 81.63 | 86.02 |
| Zm00001d013222_P001 | Maize | extracellular | 77.55 | 79.17 |
| Solyc04g078200.2.1 | Tomato | extracellular | 47.96 | 72.31 |
| GSMUA_Achr6P11160_001 | Banana | extracellular | 63.27 | 68.13 |
| GSMUA_Achr6P02260_001 | Banana | extracellular | 61.22 | 65.93 |
| GSMUA_Achr10P... | Banana | extracellular | 60.2 | 64.84 |
| Solyc12g042500.1.1 | Tomato | extracellular | 58.16 | 64.77 |
| PGSC0003DMT400037423 | Potato | extracellular | 57.14 | 63.64 |
| Bra019917.1-P | Field mustard | cytosol | 42.86 | 63.64 |
| Solyc12g042520.1.1 | Tomato | extracellular | 56.12 | 62.5 |
| GSMUA_Achr10P... | Banana | extracellular | 58.16 | 61.96 |
| PGSC0003DMT400055426 | Potato | extracellular | 54.08 | 60.23 |
| VIT_18s0001g09460.t01 | Wine grape | extracellular | 54.08 | 60.23 |
| KRH52061 | Soybean | extracellular | 53.06 | 59.09 |
| KRG91068 | Soybean | extracellular | 53.06 | 57.78 |
| CDY20617 | Canola | extracellular | 51.02 | 56.82 |
| CDY20958 | Canola | extracellular | 51.02 | 56.82 |
| KRH05612 | Soybean | extracellular | 51.02 | 56.82 |
| VIT_03s0091g00390.t01 | Wine grape | extracellular | 51.02 | 56.82 |
| KRH35705 | Soybean | extracellular | 52.04 | 56.67 |
| PGSC0003DMT400047535 | Potato | extracellular | 51.02 | 56.18 |
| KRH15429 | Soybean | extracellular | 50.0 | 55.68 |
| AT2G39540.1 | Thale cress | extracellular | 48.98 | 55.17 |
| Solyc08g005620.2.1 | Tomato | extracellular | 50.0 | 55.06 |
| AT5G59845.1 | Thale cress | extracellular | 48.98 | 53.93 |
| CDX88727 | Canola | extracellular | 50.0 | 53.85 |
| CDX71072 | Canola | extracellular | 50.0 | 53.85 |
| Bra002526.1-P | Field mustard | extracellular | 50.0 | 53.26 |
| CDY31591 | Canola | extracellular | 50.0 | 53.26 |
| Bra002525.1-P | Field mustard | extracellular | 50.0 | 53.26 |
| CDX80223 | Canola | extracellular | 50.0 | 53.26 |
| Bra020281.1-P | Field mustard | extracellular | 46.94 | 52.87 |
| CDY72009 | Canola | extracellular | 46.94 | 52.27 |
| CDX80222 | Canola | extracellular | 48.98 | 52.17 |
| CDY31590 | Canola | extracellular | 48.98 | 52.17 |
| PGSC0003DMT400066182 | Potato | extracellular | 46.94 | 51.69 |
| Solyc01g107370.2.1 | Tomato | extracellular | 46.94 | 51.69 |
| CDY09248 | Canola | extracellular | 46.94 | 51.69 |
| AT1G10588.1 | Thale cress | extracellular | 46.94 | 51.11 |
| CDX93402 | Canola | endoplasmic reticulum, extracellular | 46.94 | 48.94 |
| CDY50148 | Canola | extracellular | 43.88 | 44.79 |
| Bra013115.1-P | Field mustard | extracellular | 46.94 | 43.4 |
| CDX89647 | Canola | extracellular | 46.94 | 43.4 |
| CDX93153 | Canola | extracellular | 46.94 | 43.4 |
| CDY22975 | Canola | extracellular | 42.86 | 43.3 |
| AT2G14900.1 | Thale cress | extracellular | 46.94 | 42.59 |
| VIT_07s0129g00580.t01 | Wine grape | extracellular | 55.1 | 42.52 |
| Bra039830.1-P | Field mustard | extracellular | 45.92 | 42.06 |
| TraesCS7B01G115300.1 | Wheat | extracellular | 41.84 | 41.41 |
| CDY54472 | Canola | extracellular | 45.92 | 41.28 |
| CDY52417 | Canola | extracellular | 44.9 | 40.74 |
| TraesCS1B01G404100.1 | Wheat | extracellular | 40.82 | 38.84 |
| TraesCS5B01G225600.1 | Wheat | extracellular | 38.78 | 33.93 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G403600.1 | EnsemblPlantsGene:TraesCS5B01G403600 | InterPro:GASA | PANTHER:PTHR23201 | PANTHER:PTHR23201:SF10 | PFAM:PF02704 |
| SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix | MapMan:11.10.2.1.1 | : | : |
Description
No Description!
Coordinates
chr5B:-:580124431..580125178
Molecular Weight (calculated)
10375.8 Da
IEP (calculated)
8.694
GRAVY (calculated)
-0.051
Length
98 amino acids
Sequence
(BLAST)
(BLAST)
1: MKKLRTTTAT TTLALLLLLV LLAATSLRVA MAGSAFCDGK CGVRCSKASR HDDCLKYCGI CCAECNCVPS GTAGNKDECP CYRDKTTGHG ARTRPKCP
1: MKFPAVKVLI ISLLITSSLF ILSTADSSPC GGKCNVRCSK AGRQDRCLKY CNICCEKCNY CVPSGTYGNK DECPCYRDMK NSKGTSKCP
Arabidopsis Description
GASA10Gibberellin-regulated protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFM2]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.