CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra020281.1-P	Field mustard	extracellular	97.75	100.0
CDY31591	Canola	extracellular	85.39	82.61
CDY31590	Canola	extracellular	85.39	82.61
CDX80223	Canola	extracellular	85.39	82.61
CDX88727	Canola	extracellular	83.15	81.32
CDX80222	Canola	extracellular	83.15	80.43
CDX71072	Canola	extracellular	82.02	80.22
AT5G59845.1	Thale cress	extracellular	78.65	78.65
CDY20958	Canola	extracellular	70.79	71.59
CDY20617	Canola	extracellular	70.79	71.59
GSMUA_Achr6P07810_001	Banana	cytosol	37.08	70.21
CDY72009	Canola	extracellular	67.42	68.18
CDX93402	Canola	endoplasmic reticulum, extracellular	65.17	61.7
VIT_03s0091g00390.t01	Wine grape	extracellular	56.18	56.82
KRH35705	Soybean	extracellular	57.3	56.67
KRG91068	Soybean	extracellular	57.3	56.67
GSMUA_Achr6P02260_001	Banana	extracellular	56.18	54.95
Os03t0760800-01	Rice	extracellular	56.18	53.76
TraesCS5D01G408000.1	Wheat	extracellular	56.18	53.19
GSMUA_Achr5P16080_001	Banana	extracellular	46.07	52.56
TraesCS5A01G398500.1	Wheat	extracellular	55.06	52.13
TraesCS5B01G403500.1	Wheat	extracellular	55.06	52.13
Zm00001d013222_P001	Maize	extracellular	56.18	52.08
EER90847	Sorghum	extracellular	53.93	51.61
TraesCS5A01G398600.1	Wheat	endoplasmic reticulum, extracellular	55.06	51.04
GSMUA_Achr10P...	Banana	extracellular	51.69	50.55
GSMUA_Achr6P11160_001	Banana	extracellular	50.56	49.45
CDY14668	Canola	cytosol	40.45	48.65
CDX89647	Canola	extracellular	56.18	47.17
CDX93153	Canola	extracellular	56.18	47.17
TraesCS5B01G403600.1	Wheat	endoplasmic reticulum, extracellular	51.69	46.94
CDY54472	Canola	extracellular	57.3	46.79
GSMUA_Achr10P...	Banana	extracellular	48.31	46.74
CDY22975	Canola	extracellular	50.56	46.39
CDY52417	Canola	extracellular	56.18	46.3
TraesCS5D01G408100.1	Wheat	endoplasmic reticulum, extracellular	50.56	45.92
TraesCS5A01G398700.1	Wheat	endoplasmic reticulum, extracellular	49.44	44.9
CDY50148	Canola	extracellular	48.31	44.79
CDY46336	Canola	extracellular	44.94	38.46
CDY18069	Canola	extracellular	44.94	38.46
CDY27104	Canola	extracellular	43.82	37.14
CDY71845	Canola	extracellular	39.33	34.65
CDY60168	Canola	extracellular	42.7	31.67
CDY00909	Canola	extracellular	41.57	31.09
CDY41324	Canola	cytosol	38.2	30.63
CDX91001	Canola	extracellular	35.96	30.19
CDX85557	Canola	extracellular	35.96	30.19
CDX70601	Canola	extracellular	35.96	30.19
CDY22221	Canola	extracellular	42.7	29.69
CDX78620	Canola	cytosol	33.71	21.43

Protein Annotations

EnsemblPlants:CDY09248	EnsemblPlantsGene:GSBRNA2T00001502001	InterPro:GASA	PANTHER:PTHR23201	PANTHER:PTHR23201:SF10	PFAM:PF02704
ProteinID:CDY09248	ProteinID:CDY09248.1	SEG:seg	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0004EE0190
UniProt:A0A078FBH6	MapMan:11.10.2.1.1	:	:	:	:

Description

BnaA02g06740DBnaA02g06740D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FBH6]

Coordinates

chrLK031993:-:924148..925492

Molecular Weight (calculated)

9907.2 Da

IEP (calculated)

8.813

GRAVY (calculated)

-0.344

Length

89 amino acids

Sequence
(BLAST)

1: MKMKRAVVSF VIISLILSSS LFMLSEASPC DGKCNARCSK AGRKDRCLKY CNICCEKCNY CVPSGTYGNK DECPCYRDMK NSKGQPKCP

Best Arabidopsis Sequence Match ( AT5G59845.1 )
(BLAST)

1: MKFPAVKVLI ISLLITSSLF ILSTADSSPC GGKCNVRCSK AGRQDRCLKY CNICCEKCNY CVPSGTYGNK DECPCYRDMK NSKGTSKCP

Arabidopsis Description

GASA10Gibberellin-regulated protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFM2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.