Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G408000.1 | Wheat | extracellular | 91.67 | 93.62 |
| TraesCS5B01G403500.1 | Wheat | extracellular | 91.67 | 93.62 |
| TraesCS5A01G398500.1 | Wheat | extracellular | 88.54 | 90.43 |
| Os03t0760800-01 | Rice | extracellular | 80.21 | 82.8 |
| TraesCS5A01G398700.1 | Wheat | endoplasmic reticulum, extracellular | 81.25 | 79.59 |
| EER90847 | Sorghum | extracellular | 77.08 | 79.57 |
| Zm00001d013222_P001 | Maize | extracellular | 75.0 | 75.0 |
| Solyc04g078200.2.1 | Tomato | extracellular | 50.0 | 73.85 |
| GSMUA_Achr6P11160_001 | Banana | extracellular | 64.58 | 68.13 |
| Solyc12g042500.1.1 | Tomato | extracellular | 61.46 | 67.05 |
| GSMUA_Achr6P02260_001 | Banana | extracellular | 62.5 | 65.93 |
| GSMUA_Achr10P... | Banana | extracellular | 62.5 | 65.93 |
| PGSC0003DMT400037423 | Potato | extracellular | 60.42 | 65.91 |
| VIT_18s0001g09460.t01 | Wine grape | extracellular | 59.38 | 64.77 |
| Solyc12g042520.1.1 | Tomato | extracellular | 58.33 | 63.64 |
| PGSC0003DMT400055426 | Potato | extracellular | 57.29 | 62.5 |
| KRH52061 | Soybean | extracellular | 57.29 | 62.5 |
| KRH05612 | Soybean | extracellular | 55.21 | 60.23 |
| GSMUA_Achr10P... | Banana | extracellular | 57.29 | 59.78 |
| Bra019917.1-P | Field mustard | cytosol | 40.62 | 59.09 |
| KRH15429 | Soybean | extracellular | 54.17 | 59.09 |
| KRH35705 | Soybean | extracellular | 55.21 | 58.89 |
| KRG91068 | Soybean | extracellular | 55.21 | 58.89 |
| PGSC0003DMT400047535 | Potato | extracellular | 54.17 | 58.43 |
| AT2G39540.1 | Thale cress | extracellular | 52.08 | 57.47 |
| Solyc08g005620.2.1 | Tomato | extracellular | 53.12 | 57.3 |
| CDY20958 | Canola | extracellular | 52.08 | 56.82 |
| CDY20617 | Canola | extracellular | 52.08 | 56.82 |
| VIT_03s0091g00390.t01 | Wine grape | extracellular | 52.08 | 56.82 |
| Bra002526.1-P | Field mustard | extracellular | 54.17 | 56.52 |
| CDX80223 | Canola | extracellular | 54.17 | 56.52 |
| CDY31591 | Canola | extracellular | 54.17 | 56.52 |
| AT5G59845.1 | Thale cress | extracellular | 52.08 | 56.18 |
| CDX88727 | Canola | extracellular | 53.12 | 56.04 |
| CDX71072 | Canola | extracellular | 53.12 | 56.04 |
| CDY31590 | Canola | extracellular | 53.12 | 55.43 |
| Bra002525.1-P | Field mustard | extracellular | 53.12 | 55.43 |
| CDX80222 | Canola | extracellular | 53.12 | 55.43 |
| Bra020281.1-P | Field mustard | extracellular | 50.0 | 55.17 |
| CDY09248 | Canola | extracellular | 51.04 | 55.06 |
| Solyc01g107370.2.1 | Tomato | extracellular | 51.04 | 55.06 |
| PGSC0003DMT400066182 | Potato | extracellular | 51.04 | 55.06 |
| CDY72009 | Canola | extracellular | 48.96 | 53.41 |
| AT1G10588.1 | Thale cress | extracellular | 48.96 | 52.22 |
| CDY50148 | Canola | extracellular | 48.96 | 48.96 |
| CDX93402 | Canola | endoplasmic reticulum, extracellular | 47.92 | 48.94 |
| CDY22975 | Canola | extracellular | 48.96 | 48.45 |
| AT2G14900.1 | Thale cress | extracellular | 52.08 | 46.3 |
| Bra013115.1-P | Field mustard | extracellular | 51.04 | 46.23 |
| CDX89647 | Canola | extracellular | 51.04 | 46.23 |
| CDX93153 | Canola | extracellular | 51.04 | 46.23 |
| TraesCS1A01G381700.1 | Wheat | cytosol | 36.46 | 44.87 |
| Bra039830.1-P | Field mustard | extracellular | 48.96 | 43.93 |
| VIT_07s0129g00580.t01 | Wine grape | extracellular | 57.29 | 43.31 |
| CDY54472 | Canola | extracellular | 48.96 | 43.12 |
| CDY52417 | Canola | extracellular | 47.92 | 42.59 |
| TraesCS1A01G381600.1 | Wheat | extracellular | 41.67 | 38.84 |
| TraesCS7A01G208100.1 | Wheat | extracellular | 40.62 | 38.61 |
| TraesCS5A01G227000.1 | Wheat | extracellular | 36.46 | 31.25 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G398600.1 | EnsemblPlantsGene:TraesCS5A01G398600 | InterPro:GASA | PANTHER:PTHR23201 | PANTHER:PTHR23201:SF10 | PFAM:PF02704 |
| SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix | MapMan:11.10.2.1.1 | : | : |
Description
No Description!
Coordinates
chr5A:-:592474249..592474653
Molecular Weight (calculated)
10283.7 Da
IEP (calculated)
9.157
GRAVY (calculated)
-0.176
Length
96 amino acids
Sequence
(BLAST)
(BLAST)
1: MTMKLRPTAT TVALLLFLLL ASSSLRAAMA GSAFCDSKCR VRCSKAGRHD DCLKYCGICC AQCNCVPSGT AGNKNECPCY RDKTTGQGAR KRPKCP
1: MKLVVVQFFI ISLLLTSSFS VLSSADSSCG GKCNVRCSKA GQHEECLKYC NICCQKCNCV PSGTFGHKDE CPCYRDMKNS KGGSKCP
Arabidopsis Description
Gibberellin-regulated protein 8 [Source:UniProtKB/Swiss-Prot;Acc:O80641]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.