Factsheet for VIT_03s0091g00390.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 5
nucleus 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	golgi, nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P07810_001	Banana	cytosol	39.77	74.47
VIT_18s0001g09460.t01	Wine grape	extracellular	68.18	68.18
KRH35705	Soybean	extracellular	69.32	67.78
KRG91068	Soybean	extracellular	69.32	67.78
Bra019917.1-P	Field mustard	cytosol	46.59	62.12
GSMUA_Achr6P11160_001	Banana	extracellular	60.23	58.24
GSMUA_Achr10P...	Banana	extracellular	60.23	58.24
Bra020281.1-P	Field mustard	extracellular	56.82	57.47
AT5G59845.1	Thale cress	extracellular	57.95	57.3
CDY20958	Canola	extracellular	56.82	56.82
CDY20617	Canola	extracellular	56.82	56.82
GSMUA_Achr10P...	Banana	extracellular	59.09	56.52
GSMUA_Achr5P16080_001	Banana	extracellular	50.0	56.41
AT2G39540.1	Thale cress	extracellular	55.68	56.32
CDY09248	Canola	extracellular	56.82	56.18
TraesCS5A01G398500.1	Wheat	extracellular	59.09	55.32
CDX71072	Canola	extracellular	56.82	54.95
CDX88727	Canola	extracellular	56.82	54.95
GSMUA_Achr6P02260_001	Banana	extracellular	56.82	54.95
AT1G10588.1	Thale cress	extracellular	55.68	54.44
CDY31590	Canola	extracellular	56.82	54.35
Bra002526.1-P	Field mustard	extracellular	56.82	54.35
CDX80223	Canola	extracellular	56.82	54.35
CDY31591	Canola	extracellular	56.82	54.35
TraesCS5B01G403500.1	Wheat	extracellular	57.95	54.26
TraesCS5D01G408000.1	Wheat	extracellular	57.95	54.26
CDY72009	Canola	extracellular	53.41	53.41
Bra002525.1-P	Field mustard	extracellular	55.68	53.26
VIT_07s0129g00580.t01	Wine grape	extracellular	76.14	52.76
Os03t0760800-01	Rice	extracellular	55.68	52.69
CDX80222	Canola	extracellular	54.55	52.17
TraesCS5A01G398600.1	Wheat	endoplasmic reticulum, extracellular	56.82	52.08
Zm00001d013222_P001	Maize	extracellular	55.68	51.04
TraesCS5B01G403600.1	Wheat	endoplasmic reticulum, extracellular	56.82	51.02
TraesCS5D01G408100.1	Wheat	endoplasmic reticulum, extracellular	56.82	51.02
EER90847	Sorghum	extracellular	53.41	50.54
CDX93402	Canola	endoplasmic reticulum, extracellular	52.27	48.94
TraesCS5A01G398700.1	Wheat	endoplasmic reticulum, extracellular	53.41	47.96
VIT_00s0189g00060.t01	Wine grape	cytosol, extracellular, nucleus	34.09	46.88
VIT_00s0189g00070.t01	Wine grape	endoplasmic reticulum, extracellular	42.05	42.53
VIT_17s0000g06210.t01	Wine grape	extracellular	38.64	32.69
VIT_08s0007g05860.t01	Wine grape	extracellular	42.05	32.46
VIT_14s0108g00740.t01	Wine grape	extracellular	37.5	31.13

Protein Annotations

ArrayExpress:VIT_03s0091g00390	EMBL:FN595242	EnsemblPlants:VIT_03s0091g00390.t01	EnsemblPlantsGene:VIT_03s0091g00390	EntrezGene:100245601	EntrezGene:LOC100245601
InterPro:GASA	PANTHER:PTHR23201	PANTHER:PTHR23201:SF10	PFAM:PF02704	ProteinID:CBI22497	ProteinID:CBI22497.3
RefSeq:XP_002271730	RefSeq:XP_002271730.1	SEG:seg	SignalP:SignalP-noTM	unigene:Vvi.14046	UniParc:UPI0001982E09
UniProt:D7SXU7	wikigene:100245601	wikigene:LOC100245601	MapMan:11.10.2.1.1	:	:

Description

No Description!

Coordinates

chr3:-:6715491..6716068

Molecular Weight (calculated)

9711.0 Da

IEP (calculated)

8.736

GRAVY (calculated)

-0.281

Length

88 amino acids

Sequence
(BLAST)

1: MKHLFPTLLL LSLLLHSCFS QPTTDGAGFC GLKCSKRCSQ AAVLDRCMKY CGICCQECKC VPSGTYGNKH ECPCYRDKKN SKGKPKCP

Best Arabidopsis Sequence Match ( AT2G14900.1 )
(BLAST)

001: MKIIVSILVL ASLLLISSSL ASATISDAFG SGAVAPAPQS KDGPALEKWC GQKCEGRCKE AGMKDRCLKY CGICCKDCQC VPSGTYGNKH ECACYRDKLS
101: SKGTPKCP

Arabidopsis Description

GASA7Gibberellin-regulated protein 7 [Source:UniProtKB/Swiss-Prot;Acc:O82328]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.