Factsheet for GSMUA_Achr10P30190_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 6
nucleus 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	golgi, nucleus, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	extracellular	80.43	81.32
GSMUA_Achr6P02260_001	Banana	extracellular	79.35	80.22
GSMUA_Achr6P11160_001	Banana	extracellular	79.35	80.22
Solyc04g078200.2.1	Tomato	extracellular	52.17	73.85
GSMUA_Achr6P07810_001	Banana	cytosol	33.7	65.96
PGSC0003DMT400055426	Potato	extracellular	61.96	64.77
VIT_18s0001g09460.t01	Wine grape	extracellular	60.87	63.64
PGSC0003DMT400037423	Potato	extracellular	60.87	63.64
Solyc12g042520.1.1	Tomato	extracellular	60.87	63.64
Solyc12g042500.1.1	Tomato	extracellular	59.78	62.5
Os03t0760800-01	Rice	extracellular	63.04	62.37
Bra019917.1-P	Field mustard	cytosol	44.57	62.12
Solyc08g005620.2.1	Tomato	extracellular	58.7	60.67
PGSC0003DMT400047535	Potato	extracellular	58.7	60.67
TraesCS5B01G403500.1	Wheat	extracellular	60.87	59.57
TraesCS5D01G408100.1	Wheat	endoplasmic reticulum, extracellular	63.04	59.18
VIT_03s0091g00390.t01	Wine grape	extracellular	56.52	59.09
TraesCS5A01G398500.1	Wheat	extracellular	59.78	58.51
TraesCS5D01G408000.1	Wheat	extracellular	59.78	58.51
TraesCS5B01G403600.1	Wheat	endoplasmic reticulum, extracellular	61.96	58.16
EER90847	Sorghum	extracellular	58.7	58.06
KRH52061	Soybean	extracellular	55.43	57.95
KRH15429	Soybean	extracellular	55.43	57.95
KRH05612	Soybean	extracellular	55.43	57.95
TraesCS5A01G398600.1	Wheat	endoplasmic reticulum, extracellular	59.78	57.29
TraesCS5A01G398700.1	Wheat	endoplasmic reticulum, extracellular	60.87	57.14
GSMUA_Achr5P16080_001	Banana	extracellular	47.83	56.41
Zm00001d013222_P001	Maize	extracellular	58.7	56.25
PGSC0003DMT400066182	Potato	extracellular	53.26	55.06
AT5G59845.1	Thale cress	extracellular	53.26	55.06
Solyc01g107370.2.1	Tomato	extracellular	53.26	55.06
CDY20617	Canola	extracellular	52.17	54.55
CDY20958	Canola	extracellular	52.17	54.55
CDY72009	Canola	extracellular	51.09	53.41
KRH35705	Soybean	extracellular	52.17	53.33
KRG91068	Soybean	extracellular	52.17	53.33
CDX71072	Canola	extracellular	51.09	51.65
CDX80223	Canola	extracellular	51.09	51.09
CDY31591	Canola	extracellular	51.09	51.09
Bra002526.1-P	Field mustard	extracellular	51.09	51.09
CDX88727	Canola	extracellular	50.0	50.55
CDX80222	Canola	extracellular	50.0	50.0
CDY31590	Canola	extracellular	50.0	50.0
Bra002525.1-P	Field mustard	extracellular	50.0	50.0
CDX93402	Canola	endoplasmic reticulum, extracellular	51.09	50.0
AT1G10588.1	Thale cress	extracellular	48.91	50.0
Bra020281.1-P	Field mustard	extracellular	46.74	49.43
AT2G39540.1	Thale cress	extracellular	46.74	49.43
GSMUA_Achr11P...	Banana	cytosol	39.13	49.32
CDY09248	Canola	extracellular	46.74	48.31
CDX89647	Canola	extracellular	51.09	44.34
Bra013115.1-P	Field mustard	extracellular	51.09	44.34
CDX93153	Canola	extracellular	51.09	44.34
AT2G14900.1	Thale cress	extracellular	51.09	43.52
CDY22975	Canola	extracellular	45.65	43.3
CDY50148	Canola	extracellular	44.57	42.71
VIT_07s0129g00580.t01	Wine grape	extracellular	57.61	41.73
Bra039830.1-P	Field mustard	extracellular	47.83	41.12
CDY52417	Canola	extracellular	47.83	40.74
CDY54472	Canola	extracellular	47.83	40.37
GSMUA_Achr6P02710_001	Banana	extracellular	41.3	34.86
GSMUA_Achr7P18070_001	Banana	extracellular	40.22	33.95
GSMUA_Achr7P21680_001	Banana	extracellular	34.78	31.37
GSMUA_Achr9P27170_001	Banana	endoplasmic reticulum, extracellular, plastid	42.39	30.71
GSMUA_Achr8P22060_001	Banana	extracellular	36.96	28.1
GSMUA_Achr11P...	Banana	extracellular	38.04	27.78
GSMUA_Achr4P02320_001	Banana	extracellular	33.7	26.96

Protein Annotations

EnsemblPlants:GSMUA_Achr10P30190_001	EnsemblPlants:GSMUA_Achr10T30190_001	EnsemblPlantsGene:GSMUA_Achr10G30190_001	InterPro:GASA	PANTHER:PTHR23201	PANTHER:PTHR23201:SF10
PFAM:PF02704	PFscan:PS51257	SignalP:SignalP-noTM	UniParc:UPI000295CF16	UniProt:M0RMP3	MapMan:11.10.2.1.1

Description

Snakin-1 [Source:GMGC_GENE;Acc:GSMUA_Achr10G30190_001]

Coordinates

chr10:+:32431985..32432589

Molecular Weight (calculated)

10071.4 Da

IEP (calculated)

8.738

GRAVY (calculated)

-0.071

Length

92 amino acids

Sequence
(BLAST)

1: MRPLFATLTL VLILFTSSCQ QVTMAAGSAF CGSKCKVRCS KASLQDRCIK VCGLCCEACR CVPSGTYGNK DECPCYRDKY TGEGVRRRPK CP

Best Arabidopsis Sequence Match ( AT5G59845.1 )
(BLAST)

1: MKFPAVKVLI ISLLITSSLF ILSTADSSPC GGKCNVRCSK AGRQDRCLKY CNICCEKCNY CVPSGTYGNK DECPCYRDMK NSKGTSKCP

Arabidopsis Description

GASA10Gibberellin-regulated protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFM2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.