Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 5
- nucleus 2
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | cytosol | 40.16 | 69.86 |
| GSMUA_Achr6P07810_001 | Banana | cytosol | 18.11 | 48.94 |
| GSMUA_Achr7P21680_001 | Banana | extracellular | 34.65 | 43.14 |
| GSMUA_Achr8P22060_001 | Banana | extracellular | 40.94 | 42.98 |
| GSMUA_Achr10P... | Banana | extracellular | 30.71 | 42.39 |
| GSMUA_Achr7P18070_001 | Banana | extracellular | 35.43 | 41.28 |
| GSMUA_Achr11P... | Banana | extracellular | 40.94 | 41.27 |
| GSMUA_Achr5P16080_001 | Banana | extracellular | 25.2 | 41.03 |
| GSMUA_Achr4P02320_001 | Banana | extracellular | 37.01 | 40.87 |
| GSMUA_Achr6P02260_001 | Banana | extracellular | 29.13 | 40.66 |
| GSMUA_Achr6P11160_001 | Banana | extracellular | 29.13 | 40.66 |
| GSMUA_Achr6P02710_001 | Banana | extracellular | 34.65 | 40.37 |
| GSMUA_Achr10P... | Banana | extracellular | 28.35 | 39.56 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P27170_001 | EnsemblPlants:GSMUA_Achr9T27170_001 | EnsemblPlantsGene:GSMUA_Achr9G27170_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:GASA | PANTHER:PTHR23201 | PANTHER:PTHR23201:SF24 | PFAM:PF02704 | SignalP:SignalP-TM | TMHMM:TMhelix |
| UniParc:UPI000296DC8B | UniProt:M0U3X4 | MapMan:11.10.2.1.1 | : | : | : |
Description
Protein RSI-1 [Source:GMGC_GENE;Acc:GSMUA_Achr9G27170_001]
Coordinates
chr9:-:31431227..31431610
Molecular Weight (calculated)
14509.7 Da
IEP (calculated)
8.104
GRAVY (calculated)
0.195
Length
127 amino acids
Sequence
(BLAST)
(BLAST)
001: MHFSVISQYC WCCTLTVVSL CFSFGPLECQ KWFSQAFRYC YVLNSSIVFV LVWSCGRMCY NLWVVIAECN NKCDFRCSAT SHKKPCLFFC KECCATCLCV
101: PPGTYGNKEA CPCYNNWKTK EGGPKCP
101: PPGTYGNKEA CPCYNNWKTK EGGPKCP
1: MANCIRRNAL FFLTLLFLLS VSNLVQAARG GGKLKPQQCN SKCSFRCSAT SHKKPCMFFC LKCCKKCLCV PPGTFGNKQT CPCYNNWKTK EGRPKCP
Arabidopsis Description
GASA5Gibberellin-regulated protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q84J95]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.