Factsheet for GSMUA_Achr10P18090_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	golgi, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P11160_001	Banana	extracellular	91.21	91.21
GSMUA_Achr10P...	Banana	extracellular	81.32	80.43
GSMUA_Achr6P02260_001	Banana	extracellular	80.22	80.22
Solyc04g078200.2.1	Tomato	extracellular	53.85	75.38
GSMUA_Achr6P07810_001	Banana	cytosol	36.26	70.21
VIT_18s0001g09460.t01	Wine grape	extracellular	62.64	64.77
Os03t0760800-01	Rice	extracellular	65.93	64.52
TraesCS5B01G403500.1	Wheat	extracellular	65.93	63.83
Bra019917.1-P	Field mustard	cytosol	46.15	63.64
PGSC0003DMT400055426	Potato	extracellular	61.54	63.64
Solyc12g042520.1.1	Tomato	extracellular	61.54	63.64
GSMUA_Achr5P16080_001	Banana	extracellular	53.85	62.82
TraesCS5A01G398500.1	Wheat	extracellular	64.84	62.77
TraesCS5D01G408000.1	Wheat	extracellular	64.84	62.77
TraesCS5A01G398600.1	Wheat	endoplasmic reticulum, extracellular	65.93	62.5
KRH52061	Soybean	extracellular	60.44	62.5
EER90847	Sorghum	extracellular	63.74	62.37
PGSC0003DMT400037423	Potato	extracellular	59.34	61.36
TraesCS5D01G408100.1	Wheat	endoplasmic reticulum, extracellular	65.93	61.22
Solyc12g042500.1.1	Tomato	extracellular	58.24	60.23
VIT_03s0091g00390.t01	Wine grape	extracellular	58.24	60.23
TraesCS5B01G403600.1	Wheat	endoplasmic reticulum, extracellular	64.84	60.2
Solyc08g005620.2.1	Tomato	extracellular	58.24	59.55
PGSC0003DMT400047535	Potato	extracellular	58.24	59.55
TraesCS5A01G398700.1	Wheat	endoplasmic reticulum, extracellular	63.74	59.18
KRH05612	Soybean	extracellular	57.14	59.09
KRH15429	Soybean	extracellular	57.14	59.09
PGSC0003DMT400066182	Potato	extracellular	57.14	58.43
Solyc01g107370.2.1	Tomato	extracellular	57.14	58.43
Zm00001d013222_P001	Maize	extracellular	61.54	58.33
AT5G59845.1	Thale cress	extracellular	56.04	57.3
CDY20958	Canola	extracellular	54.95	56.82
CDY20617	Canola	extracellular	54.95	56.82
KRH35705	Soybean	extracellular	56.04	56.67
KRG91068	Soybean	extracellular	54.95	55.56
GSMUA_Achr11P...	Banana	cytosol	43.96	54.79
CDY72009	Canola	extracellular	52.75	54.55
AT2G39540.1	Thale cress	extracellular	51.65	54.02
CDX71072	Canola	extracellular	53.85	53.85
CDX80223	Canola	extracellular	53.85	53.26
Bra002525.1-P	Field mustard	extracellular	53.85	53.26
Bra020281.1-P	Field mustard	extracellular	50.55	52.87
CDX88727	Canola	extracellular	52.75	52.75
Bra002526.1-P	Field mustard	extracellular	52.75	52.17
CDY31591	Canola	extracellular	52.75	52.17
CDY09248	Canola	extracellular	50.55	51.69
AT1G10588.1	Thale cress	extracellular	50.55	51.11
CDY31590	Canola	extracellular	51.65	51.09
CDX80222	Canola	extracellular	51.65	51.09
CDX93402	Canola	endoplasmic reticulum, extracellular	51.65	50.0
AT2G14900.1	Thale cress	extracellular	56.04	47.22
CDY22975	Canola	extracellular	49.45	46.39
Bra039830.1-P	Field mustard	extracellular	53.85	45.79
CDY52417	Canola	extracellular	53.85	45.37
CDX89647	Canola	extracellular	52.75	45.28
CDX93153	Canola	extracellular	52.75	45.28
Bra013115.1-P	Field mustard	extracellular	52.75	45.28
CDY54472	Canola	extracellular	53.85	44.95
CDY50148	Canola	extracellular	47.25	44.79
VIT_07s0129g00580.t01	Wine grape	extracellular	58.24	41.73
GSMUA_Achr6P02710_001	Banana	extracellular	42.86	35.78
GSMUA_Achr7P18070_001	Banana	extracellular	39.56	33.03
GSMUA_Achr11P...	Banana	extracellular	42.86	30.95
GSMUA_Achr4P02320_001	Banana	extracellular	37.36	29.57
GSMUA_Achr7P21680_001	Banana	extracellular	32.97	29.41
GSMUA_Achr9P27170_001	Banana	endoplasmic reticulum, extracellular, plastid	39.56	28.35
GSMUA_Achr8P22060_001	Banana	extracellular	35.16	26.45

Protein Annotations

EnsemblPlants:GSMUA_Achr10P18090_001	EnsemblPlants:GSMUA_Achr10T18090_001	EnsemblPlantsGene:GSMUA_Achr10G18090_001	InterPro:GASA	PANTHER:PTHR23201	PANTHER:PTHR23201:SF10
PFAM:PF02704	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000295D164	UniProt:M0RJ84	MapMan:11.10.2.1.1

Description

Snakin-1 [Source:GMGC_GENE;Acc:GSMUA_Achr10G18090_001]

Coordinates

chr10:+:24996346..24997057

Molecular Weight (calculated)

10078.5 Da

IEP (calculated)

9.268

GRAVY (calculated)

-0.236

Length

91 amino acids

Sequence
(BLAST)

1: MKPLHAIVAL LLILFTSSYL QATMAGSAFC GSKCKVRCSK ASVKDRCLKY CGLCCEQCRC VPSGTYGHKD ECPCYRDKYT GSGKRRRPKC P

Best Arabidopsis Sequence Match ( AT5G59845.1 )
(BLAST)

1: MKFPAVKVLI ISLLITSSLF ILSTADSSPC GGKCNVRCSK AGRQDRCLKY CNICCEKCNY CVPSGTYGNK DECPCYRDMK NSKGTSKCP

Arabidopsis Description

GASA10Gibberellin-regulated protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFM2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.