Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 9
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 6
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | cytosol | 40.5 | 67.12 |
| GSMUA_Achr7P21680_001 | Banana | extracellular | 45.45 | 53.92 |
| OQU77894 | Sorghum | extracellular | 60.33 | 53.28 |
| TraesCS7D01G210500.1 | Wheat | extracellular | 41.32 | 53.19 |
| TraesCS7B01G115300.1 | Wheat | extracellular | 42.98 | 52.53 |
| TraesCS7A01G208100.1 | Wheat | extracellular | 43.8 | 52.48 |
| Os06t0266800-02 | Rice | extracellular | 46.28 | 50.91 |
| Zm00001d038056_P001 | Maize | extracellular | 59.5 | 49.66 |
| EER89583 | Sorghum | extracellular | 45.45 | 48.25 |
| EES16564 | Sorghum | extracellular | 50.41 | 48.03 |
| Os05t0376800-01 | Rice | extracellular | 60.33 | 48.03 |
| GSMUA_Achr4P02320_001 | Banana | extracellular | 45.45 | 47.83 |
| GSMUA_Achr7P18070_001 | Banana | extracellular | 42.98 | 47.71 |
| GSMUA_Achr6P02710_001 | Banana | extracellular | 42.98 | 47.71 |
| Os09t0414900-01 | Rice | extracellular | 43.8 | 47.32 |
| GSMUA_Achr6P07810_001 | Banana | cytosol | 18.18 | 46.81 |
| OQU89489 | Sorghum | extracellular | 42.98 | 45.22 |
| GSMUA_Achr11P... | Banana | extracellular | 46.28 | 44.44 |
| Zm00001d023290_P001 | Maize | extracellular | 46.28 | 43.41 |
| HORVU5Hr1G065670.1 | Barley | extracellular | 39.67 | 42.48 |
| TraesCS5D01G234400.1 | Wheat | extracellular | 38.02 | 41.44 |
| GSMUA_Achr9P27170_001 | Banana | endoplasmic reticulum, extracellular, plastid | 42.98 | 40.94 |
| TraesCS5A01G227000.1 | Wheat | extracellular | 37.19 | 40.18 |
| TraesCS5B01G225600.1 | Wheat | extracellular | 36.36 | 39.29 |
| GSMUA_Achr5P16080_001 | Banana | extracellular | 23.97 | 37.18 |
| GSMUA_Achr10P... | Banana | extracellular | 28.1 | 36.96 |
| GSMUA_Achr6P02260_001 | Banana | extracellular | 27.27 | 36.26 |
| GSMUA_Achr10P... | Banana | extracellular | 26.45 | 35.16 |
| GSMUA_Achr6P11160_001 | Banana | extracellular | 26.45 | 35.16 |
| HORVU7Hr1G042390.2 | Barley | cytosol | 45.45 | 22.82 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P22060_001 | EnsemblPlants:GSMUA_Achr8T22060_001 | EnsemblPlantsGene:GSMUA_Achr8G22060_001 | InterPro:GASA | PANTHER:PTHR23201 | PANTHER:PTHR23201:SF8 |
| PFAM:PF02704 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0002963EFE | UniProt:M0TSK9 | MapMan:11.10.2.1.1 |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G22060_001]
Coordinates
chr8:+:26756498..26757589
Molecular Weight (calculated)
13025.3 Da
IEP (calculated)
9.030
GRAVY (calculated)
-0.090
Length
121 amino acids
Sequence
(BLAST)
(BLAST)
001: MTVENRVAIL LCMVVLHCLV IQAQGRISLA PTAQPGNPLG PTPQPIKFPM YGATPGSLQP QECSGRCAGR CSATAYKKPC MFFCQKCCAK CLCVPPGTYG
101: NKQVCPCYNN WKTKRGGPKC P
101: NKQVCPCYNN WKTKRGGPKC P
001: MATKLSIIVF SIVVLHLLLS AHMHPIYLES PARQPQPPQS QPQLPHHNNS QYGTTQGSLQ PQECGPRCGD RCSNTQYKKP CLFFCNKCCN KCLCVPPGTY
101: GNKQVCPCYN NWKTKSGGPK CP
101: GNKQVCPCYN NWKTKSGGPK CP
Arabidopsis Description
Gibberellin-regulated family protein [Source:TAIR;Acc:AT3G10185]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.