Factsheet for TraesCS7A01G208100.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G099400.1
TraesCS3B01G115800.1
TraesCS3D01G099700.1
TraesCS6A01G013700.2
TraesCS6A01G013800.1
TraesCS6B01G020900.1
TraesCS6D01G017100.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G15230.1	TraesCS3A01G099400.1	AT2G01950.1	19000166
AT5G15230.1	TraesCS3B01G115800.1	AT2G01950.1	19000166
AT5G15230.1	TraesCS3D01G099700.1	AT2G01950.1	19000166
AT5G15230.1	TraesCS6A01G013700.2	AT5G42220.1	21798944
AT5G15230.1	TraesCS6A01G013800.1	AT5G42220.1	21798944
AT5G15230.1	TraesCS6B01G020900.1	AT5G42220.1	21798944
AT5G15230.1	TraesCS6D01G017100.2	AT5G42220.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G115300.1	Wheat	extracellular	94.06	95.96
TraesCS7D01G210500.1	Wheat	extracellular	88.12	94.68
Os06t0266800-02	Rice	extracellular	82.18	75.45
EER89583	Sorghum	extracellular	77.23	68.42
PGSC0003DMT400083077	Potato	extracellular	56.44	55.34
TraesCS1A01G381700.1	Wheat	cytosol	42.57	55.13
AT5G15230.1	Thale cress	extracellular	57.43	54.72
AT1G74670.1	Thale cress	extracellular	54.46	54.46
Solyc06g069790.2.1	Tomato	extracellular	55.45	53.85
VIT_17s0000g06210.t01	Wine grape	extracellular	55.45	53.85
VIT_14s0108g00740.t01	Wine grape	extracellular	55.45	52.83
KRH40097	Soybean	extracellular	55.45	52.34
Solyc03g116060.2.1	Tomato	extracellular	53.47	51.92
PGSC0003DMT400050285	Potato	extracellular	53.47	51.92
Bra008162.1-P	Field mustard	extracellular	51.49	51.49
KRH01173	Soybean	extracellular	54.46	51.4
KRH63343	Soybean	extracellular	53.47	50.94
CDX70601	Canola	extracellular	53.47	50.94
CDY71845	Canola	extracellular	50.49	50.49
CDX91001	Canola	extracellular	52.48	50.0
CDX85557	Canola	extracellular	52.48	50.0
Bra023513.1-P	Field mustard	extracellular	52.48	50.0
TraesCS1A01G381600.1	Wheat	extracellular	50.49	49.51
KRH54552	Soybean	extracellular	51.49	49.06
KRG93532	Soybean	extracellular	52.48	48.18
TraesCS5A01G227000.1	Wheat	extracellular	51.49	46.43
Zm00001d023290_P001	Maize	extracellular	57.43	44.96
GSMUA_Achr8P22060_001	Banana	extracellular	52.48	43.8
TraesCS5A01G398700.1	Wheat	endoplasmic reticulum, extracellular	40.59	41.84
TraesCS5A01G398600.1	Wheat	endoplasmic reticulum, extracellular	38.61	40.62
TraesCS5A01G398500.1	Wheat	extracellular	37.62	40.43
CDX78620	Canola	cytosol	46.53	33.57
HORVU7Hr1G042390.2	Barley	cytosol	79.21	33.2

Protein Annotations

EnsemblPlants:TraesCS7A01G208100.1	EnsemblPlantsGene:TraesCS7A01G208100	InterPro:GASA	PANTHER:PTHR23201	PANTHER:PTHR23201:SF22	PFAM:PF02704
SEG:seg	SignalP:SignalP-noTM	TMHMM:TMhelix	MapMan:11.10.2.1.1	:	:

Description

No Description!

Coordinates

chr7A:-:170684473..170684995

Molecular Weight (calculated)

10250.6 Da

IEP (calculated)

8.681

GRAVY (calculated)

0.008

Length

101 amino acids

Sequence
(BLAST)

001: MAKISFLLVA LLVLAVGFPV EVMGGGGGGG GGGGGGNLKP WECSSKCSSR CSGTQYKKAC LTYCNKCCAT CLCVPPGTYG NKGACPCYNN WKTKEGGPKC
101: P

Best Arabidopsis Sequence Match ( AT5G15230.1 )
(BLAST)

001: MAKSYGAIFL LTLIVLFMLQ TMVMASSGSN VKWSQKRYGP GSLKRTQCPS ECDRRCKKTQ YHKACITFCN KCCRKCLCVP PGYYGNKQVC SCYNNWKTQE
101: GGPKCP

Arabidopsis Description

GASA4Gibberellin-regulated protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P46690]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.