Factsheet for Bra008162.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 6
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71845	Canola	extracellular	99.01	99.01
AT1G74670.1	Thale cress	extracellular	89.11	89.11
VIT_17s0000g06210.t01	Wine grape	extracellular	61.39	59.62
PGSC0003DMT400083077	Potato	extracellular	60.4	59.22
Solyc06g069790.2.1	Tomato	extracellular	60.4	58.65
Solyc03g116060.2.1	Tomato	extracellular	59.41	57.69
PGSC0003DMT400050285	Potato	extracellular	58.42	56.73
KRH54552	Soybean	extracellular	59.41	56.6
VIT_14s0108g00740.t01	Wine grape	extracellular	58.42	55.66
KRG93532	Soybean	extracellular	60.4	55.45
TraesCS7D01G210500.1	Wheat	extracellular	51.49	55.32
Bra021407.1-P	Field mustard	extracellular	52.48	55.21
Bra023513.1-P	Field mustard	extracellular	57.43	54.72
KRH63343	Soybean	extracellular	57.43	54.72
KRH01173	Soybean	extracellular	57.43	54.21
KRH40097	Soybean	extracellular	57.43	54.21
GSMUA_Achr7P18070_001	Banana	extracellular	58.42	54.13
TraesCS7B01G115300.1	Wheat	extracellular	52.48	53.54
GSMUA_Achr6P02710_001	Banana	extracellular	57.43	53.21
TraesCS7A01G208100.1	Wheat	extracellular	51.49	51.49
OQU89489	Sorghum	extracellular	58.42	51.3
Os09t0414900-01	Rice	extracellular	56.44	50.89
Os06t0266800-02	Rice	extracellular	53.47	49.09
HORVU5Hr1G065670.1	Barley	extracellular	54.46	48.67
Bra019917.1-P	Field mustard	cytosol	31.68	48.48
TraesCS5A01G227000.1	Wheat	extracellular	51.49	46.43
TraesCS5D01G234400.1	Wheat	extracellular	50.49	45.95
EES16564	Sorghum	extracellular	57.43	45.67
TraesCS5B01G225600.1	Wheat	extracellular	50.49	45.54
Zm00001d023290_P001	Maize	extracellular	57.43	44.96
EER89583	Sorghum	extracellular	47.52	42.11
Bra002526.1-P	Field mustard	extracellular	37.62	41.3
Bra020281.1-P	Field mustard	extracellular	34.65	40.23
Bra002525.1-P	Field mustard	extracellular	35.64	39.13
OQU77894	Sorghum	extracellular	51.49	37.96
Os05t0376800-01	Rice	extracellular	54.46	36.18
Zm00001d038056_P001	Maize	extracellular	51.49	35.86
Bra013115.1-P	Field mustard	extracellular	31.68	30.19
Bra039830.1-P	Field mustard	extracellular	30.69	28.97
HORVU7Hr1G042390.2	Barley	cytosol	46.53	19.5

Protein Annotations

EnsemblPlants:Bra008162.1	EnsemblPlants:Bra008162.1-P	EnsemblPlantsGene:Bra008162	GO:GO:0008150	GO:GO:0009628	GO:GO:0009744
GO:GO:0009749	GO:GO:0009750	GO:GO:0080167	InterPro:GASA	PANTHER:PTHR23201	PANTHER:PTHR23201:SF22
PFAM:PF02704	SEG:seg	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000254595F	UniProt:M4CVB5
MapMan:11.10.2.1.1	:	:	:	:	:

Description

AT1G74670 (E=4e-048) | gibberellin-responsive protein, putative

Coordinates

chrA02:+:13527439..13527919

Molecular Weight (calculated)

11444.0 Da

IEP (calculated)

8.668

GRAVY (calculated)

-0.239

Length

101 amino acids

Sequence
(BLAST)

001: MAKLITYLLF ITILFSFIFL TMSKETEYNP ESYGAGSLKS YQCGGECTRR CSNTKYHKPC MFFCQKCCAK CLCVPPGTYG NKQVCPCYNN WKTQQGGPKC
101: P

Best Arabidopsis Sequence Match ( AT1G74670.1 )
(BLAST)

001: MAKLITSFLL LTILFTFVCL TMSKEAEYHP ESYGPGSLKS YQCGGQCTRR CSNTKYHKPC MFFCQKCCAK CLCVPPGTYG NKQVCPCYNN WKTQQGGPKC
101: P

Arabidopsis Description

GASA6Gibberellin-regulated protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q6NMQ7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.