Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 2
- cytosol 2
- nucleus 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72009 | Canola | extracellular | 92.42 | 69.32 |
| CDX93402 | Canola | endoplasmic reticulum, extracellular | 95.45 | 67.02 |
| AT2G39540.1 | Thale cress | extracellular | 81.82 | 62.07 |
| GSMUA_Achr6P07810_001 | Banana | cytosol | 39.39 | 55.32 |
| Bra020281.1-P | Field mustard | extracellular | 72.73 | 55.17 |
| AT1G10588.1 | Thale cress | extracellular | 74.24 | 54.44 |
| Bra002525.1-P | Field mustard | extracellular | 74.24 | 53.26 |
| Bra002526.1-P | Field mustard | extracellular | 72.73 | 52.17 |
| EER90847 | Sorghum | extracellular | 66.67 | 47.31 |
| VIT_03s0091g00390.t01 | Wine grape | extracellular | 62.12 | 46.59 |
| GSMUA_Achr10P... | Banana | extracellular | 63.64 | 46.15 |
| Os03t0760800-01 | Rice | extracellular | 63.64 | 45.16 |
| GSMUA_Achr6P11160_001 | Banana | extracellular | 62.12 | 45.05 |
| GSMUA_Achr5P16080_001 | Banana | extracellular | 53.03 | 44.87 |
| Zm00001d013222_P001 | Maize | extracellular | 65.15 | 44.79 |
| TraesCS5A01G398500.1 | Wheat | extracellular | 63.64 | 44.68 |
| TraesCS5B01G403500.1 | Wheat | extracellular | 63.64 | 44.68 |
| GSMUA_Achr10P... | Banana | extracellular | 62.12 | 44.57 |
| TraesCS5D01G408000.1 | Wheat | extracellular | 62.12 | 43.62 |
| GSMUA_Achr6P02260_001 | Banana | extracellular | 59.09 | 42.86 |
| TraesCS5B01G403600.1 | Wheat | endoplasmic reticulum, extracellular | 63.64 | 42.86 |
| KRG91068 | Soybean | extracellular | 57.58 | 42.22 |
| TraesCS5D01G408100.1 | Wheat | endoplasmic reticulum, extracellular | 62.12 | 41.84 |
| TraesCS5A01G398600.1 | Wheat | endoplasmic reticulum, extracellular | 59.09 | 40.62 |
| KRH35705 | Soybean | extracellular | 54.55 | 40.0 |
| TraesCS5A01G398700.1 | Wheat | endoplasmic reticulum, extracellular | 59.09 | 39.8 |
| Bra013115.1-P | Field mustard | extracellular | 57.58 | 35.85 |
| Bra039830.1-P | Field mustard | extracellular | 57.58 | 35.51 |
| Bra021407.1-P | Field mustard | extracellular | 46.97 | 32.29 |
| Bra008162.1-P | Field mustard | extracellular | 48.48 | 31.68 |
| Bra023513.1-P | Field mustard | extracellular | 46.97 | 29.25 |
Protein Annotations
Description
AT2G39540 (E=2e-030) | gibberellin-regulated family protein
Coordinates
chrA06:+:3722606..3722806
Molecular Weight (calculated)
7172.6 Da
IEP (calculated)
8.161
GRAVY (calculated)
-0.618
Length
66 amino acids
Sequence
(BLAST)
(BLAST)
1: MHEFAACGGK CNVRCSKASQ HDLCIKDCNI CCQKCNGCVP SGTFGHRDEC PCYRDMKNSK GGPKCP
1: MKLVVVQFFI ISLLLTSSFS VLSSADSSCG GKCNVRCSKA GQHEECLKYC NICCQKCNCV PSGTFGHKDE CPCYRDMKNS KGGSKCP
Arabidopsis Description
Gibberellin-regulated protein 8 [Source:UniProtKB/Swiss-Prot;Acc:O80641]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.