Factsheet for Zm00001d013222_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90847	Sorghum	extracellular	83.33	86.02
Os03t0760800-01	Rice	extracellular	79.17	81.72
TraesCS5A01G398500.1	Wheat	extracellular	79.17	80.85
TraesCS5D01G408000.1	Wheat	extracellular	78.12	79.79
TraesCS5B01G403500.1	Wheat	extracellular	78.12	79.79
TraesCS5B01G403600.1	Wheat	endoplasmic reticulum, extracellular	79.17	77.55
TraesCS5D01G408100.1	Wheat	endoplasmic reticulum, extracellular	78.12	76.53
TraesCS5A01G398600.1	Wheat	endoplasmic reticulum, extracellular	75.0	75.0
TraesCS5A01G398700.1	Wheat	endoplasmic reticulum, extracellular	73.96	72.45
Solyc04g078200.2.1	Tomato	extracellular	46.88	69.23
Bra019917.1-P	Field mustard	cytosol	44.79	65.15
GSMUA_Achr6P11160_001	Banana	extracellular	60.42	63.74
GSMUA_Achr6P02260_001	Banana	extracellular	58.33	61.54
GSMUA_Achr10P...	Banana	extracellular	58.33	61.54
Solyc12g042500.1.1	Tomato	extracellular	56.25	61.36
KRH52061	Soybean	extracellular	56.25	61.36
PGSC0003DMT400037423	Potato	extracellular	55.21	60.23
Solyc12g042520.1.1	Tomato	extracellular	54.17	59.09
VIT_18s0001g09460.t01	Wine grape	extracellular	54.17	59.09
GSMUA_Achr10P...	Banana	extracellular	56.25	58.7
AT5G59845.1	Thale cress	extracellular	54.17	58.43
CDX71072	Canola	extracellular	55.21	58.24
CDX88727	Canola	extracellular	55.21	58.24
KRH15429	Soybean	extracellular	53.12	57.95
KRH05612	Soybean	extracellular	53.12	57.95
AT2G39540.1	Thale cress	extracellular	52.08	57.47
Bra020281.1-P	Field mustard	extracellular	52.08	57.47
CDY20958	Canola	extracellular	52.08	56.82
CDY20617	Canola	extracellular	52.08	56.82
PGSC0003DMT400055426	Potato	extracellular	52.08	56.82
CDY09248	Canola	extracellular	52.08	56.18
VIT_03s0091g00390.t01	Wine grape	extracellular	51.04	55.68
AT1G10588.1	Thale cress	extracellular	52.08	55.56
KRG91068	Soybean	extracellular	52.08	55.56
CDX80222	Canola	extracellular	53.12	55.43
CDY31591	Canola	extracellular	53.12	55.43
CDY31590	Canola	extracellular	53.12	55.43
CDX80223	Canola	extracellular	53.12	55.43
Bra002525.1-P	Field mustard	extracellular	53.12	55.43
Bra002526.1-P	Field mustard	extracellular	53.12	55.43
PGSC0003DMT400047535	Potato	extracellular	50.0	53.93
CDY72009	Canola	extracellular	48.96	53.41
KRH35705	Soybean	extracellular	50.0	53.33
Solyc08g005620.2.1	Tomato	extracellular	48.96	52.81
Solyc01g107370.2.1	Tomato	extracellular	47.92	51.69
PGSC0003DMT400066182	Potato	extracellular	47.92	51.69
CDX93402	Canola	endoplasmic reticulum, extracellular	48.96	50.0
CDY22975	Canola	extracellular	46.88	46.39
CDY50148	Canola	extracellular	45.83	45.83
Zm00001d030236_P001	Maize	extracellular	47.92	43.81
CDX93153	Canola	extracellular	46.88	42.45
CDX89647	Canola	extracellular	46.88	42.45
Bra013115.1-P	Field mustard	extracellular	46.88	42.45
AT2G14900.1	Thale cress	extracellular	45.83	40.74
Bra039830.1-P	Field mustard	extracellular	44.79	40.19
VIT_07s0129g00580.t01	Wine grape	extracellular	53.12	40.16
CDY54472	Canola	extracellular	44.79	39.45
CDY52417	Canola	extracellular	43.75	38.89
Zm00001d023290_P001	Maize	extracellular	40.62	30.23
Zm00001d038056_P001	Maize	extracellular	39.58	26.21

Protein Annotations

EMBL:BT083487	EMBL:BT086846	EMBL:BT086885	EnsemblPlants:Zm00001d013222_P001	EnsemblPlants:Zm00001d013222_T001	EnsemblPlantsGene:Zm00001d013222
EntrezGene:100501987	InterPro:GASA	PANTHER:PTHR23201	PANTHER:PTHR23201:SF10	PFAM:PF02704	ProteinID:AQK62696.1
SEG:seg	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001A4BF2D	UniProt:C4IY40	MapMan:11.10.2.1.1

Description

GRMZM2G077034Gibberellin-regulated protein 10

Coordinates

chr5:+:6718595..6719557

Molecular Weight (calculated)

10164.5 Da

IEP (calculated)

8.565

GRAVY (calculated)

0.044

Length

96 amino acids

Sequence
(BLAST)

1: MKPAATARVA GLLFFLVLLL ALPSLRVSMA GSGFCDGKCA VRCSKASRHD DCLKYCGICC ATCNCVPSGT AGNKDECPCY RDMTTGHGNR TRPKCP

Best Arabidopsis Sequence Match ( AT2G39540.1 )
(BLAST)

1: MKLVVVQFFI ISLLLTSSFS VLSSADSSCG GKCNVRCSKA GQHEECLKYC NICCQKCNCV PSGTFGHKDE CPCYRDMKNS KGGSKCP

Arabidopsis Description

Gibberellin-regulated protein 8 [Source:UniProtKB/Swiss-Prot;Acc:O80641]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.