CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039830.1-P	Field mustard	extracellular	98.15	99.07
CDY54472	Canola	extracellular	99.07	98.17
CDX89647	Canola	extracellular	85.19	86.79
CDX93153	Canola	extracellular	85.19	86.79
AT2G14900.1	Thale cress	extracellular	80.56	80.56
GSMUA_Achr6P07810_001	Banana	cytosol	31.48	72.34
Solyc08g005620.2.1	Tomato	extracellular	46.3	56.18
CDY09248	Canola	extracellular	46.3	56.18
PGSC0003DMT400047535	Potato	extracellular	45.37	55.06
CDX71072	Canola	extracellular	46.3	54.95
CDX88727	Canola	extracellular	46.3	54.95
CDY31591	Canola	extracellular	46.3	54.35
CDY31590	Canola	extracellular	46.3	54.35
GSMUA_Achr10P...	Banana	extracellular	45.37	53.85
CDY20617	Canola	extracellular	43.52	53.41
CDY20958	Canola	extracellular	43.52	53.41
CDX80222	Canola	extracellular	45.37	53.26
CDX80223	Canola	extracellular	45.37	53.26
GSMUA_Achr6P11160_001	Banana	extracellular	44.44	52.75
GSMUA_Achr5P16080_001	Banana	extracellular	37.96	52.56
TraesCS5D01G408000.1	Wheat	extracellular	44.44	51.06
CDY50148	Canola	extracellular	45.37	51.04
CDY22975	Canola	extracellular	45.37	50.52
TraesCS5B01G403500.1	Wheat	extracellular	43.52	50.0
CDY72009	Canola	extracellular	40.74	50.0
TraesCS5A01G398500.1	Wheat	extracellular	43.52	50.0
GSMUA_Achr6P02260_001	Banana	extracellular	40.74	48.35
TraesCS5A01G398600.1	Wheat	endoplasmic reticulum, extracellular	42.59	47.92
GSMUA_Achr10P...	Banana	extracellular	40.74	47.83
Os03t0760800-01	Rice	extracellular	39.81	46.24
TraesCS5B01G403600.1	Wheat	endoplasmic reticulum, extracellular	40.74	44.9
TraesCS5A01G398700.1	Wheat	endoplasmic reticulum, extracellular	40.74	44.9
EER90847	Sorghum	extracellular	37.96	44.09
TraesCS5D01G408100.1	Wheat	endoplasmic reticulum, extracellular	39.81	43.88
Zm00001d013222_P001	Maize	extracellular	38.89	43.75
CDX93402	Canola	endoplasmic reticulum, extracellular	37.96	43.62
VIT_07s0129g00580.t01	Wine grape	extracellular	48.15	40.94
CDY14668	Canola	cytosol	27.78	40.54
CDY46336	Canola	extracellular	35.19	36.54
CDY18069	Canola	extracellular	35.19	36.54
CDY41324	Canola	cytosol	32.41	31.53
CDY27104	Canola	extracellular	30.56	31.43
CDY71845	Canola	extracellular	28.7	30.69
CDY00909	Canola	extracellular	33.33	30.25
CDY60168	Canola	extracellular	33.33	30.0
CDX91001	Canola	extracellular	27.78	28.3
CDX85557	Canola	extracellular	27.78	28.3
CDX70601	Canola	extracellular	27.78	28.3
CDY22221	Canola	extracellular	33.33	28.12
CDX78620	Canola	cytosol	25.0	19.29

Protein Annotations

EnsemblPlants:CDY52417	EnsemblPlantsGene:GSBRNA2T00006868001	InterPro:GASA	PANTHER:PTHR23201	PANTHER:PTHR23201:SF10	PFAM:PF02704
ProteinID:CDY52417	ProteinID:CDY52417.1	SEG:seg	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0004EC654D
UniProt:A0A078IR26	MapMan:11.10.2.1.1	:	:	:	:

Description

BnaCnng22380DBnaCnng22380D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IR26]

Coordinates

chrLK033084:+:28809..29648

Molecular Weight (calculated)

11436.0 Da

IEP (calculated)

8.293

GRAVY (calculated)

-0.031

Length

108 amino acids

Sequence
(BLAST)

001: MKIILSIFFV ASFLIITSSL ASATISGGGG GGAVAPAPEI KDGAELEKWC GGKCEVRCEE AGMKDRCLKY CGICCKECKC VPSGTYGNKH ECACYRDKLS
101: SKKTPKCP

Best Arabidopsis Sequence Match ( AT2G14900.1 )
(BLAST)

001: MKIIVSILVL ASLLLISSSL ASATISDAFG SGAVAPAPQS KDGPALEKWC GQKCEGRCKE AGMKDRCLKY CGICCKDCQC VPSGTYGNKH ECACYRDKLS
101: SKGTPKCP

Arabidopsis Description

GASA7Gibberellin-regulated protein 7 [Source:UniProtKB/Swiss-Prot;Acc:O82328]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.