CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18069	Canola	extracellular	97.12	97.12
CDY14668	Canola	cytosol	50.96	71.62
CDY27104	Canola	extracellular	69.23	68.57
VIT_00s0189g00060.t01	Wine grape	cytosol, extracellular, nucleus	41.35	67.19
GSMUA_Achr11P...	Banana	cytosol	47.12	67.12
TraesCS1A01G381700.1	Wheat	cytosol	49.04	65.38
Os10t0115550-00	Rice	endoplasmic reticulum, extracellular	44.23	64.79
KRG97330	Soybean	extracellular	53.85	60.87
KRH18123	Soybean	extracellular	53.85	60.22
KRH18120	Soybean	extracellular	53.85	60.22
VIT_00s0189g00070.t01	Wine grape	endoplasmic reticulum, extracellular	46.15	55.17
TraesCS1A01G381600.1	Wheat	extracellular	52.88	53.4
TraesCS1D01G389400.1	Wheat	extracellular	51.92	52.43
Zm00001d030236_P001	Maize	extracellular	52.88	52.38
KXG38749	Sorghum	extracellular	51.92	51.43
Solyc06g007920.1.1	Tomato	cytosol	41.35	51.19
TraesCS1B01G404100.1	Wheat	extracellular	50.0	50.49
CDY20617	Canola	extracellular	42.31	50.0
CDY20958	Canola	extracellular	42.31	50.0
CDX71072	Canola	extracellular	43.27	49.45
CDX88727	Canola	extracellular	43.27	49.45
HORVU1Hr1G084230.1	Barley	extracellular	50.96	46.9
CDY71845	Canola	extracellular	45.19	46.53
Solyc06g007910.2.1	Tomato	extracellular, nucleus	41.35	45.74
PGSC0003DMT400003089	Potato	extracellular	41.35	45.74
CDY31591	Canola	extracellular	40.38	45.65
CDY31590	Canola	extracellular	40.38	45.65
CDX80223	Canola	extracellular	40.38	45.65
CDY09248	Canola	extracellular	38.46	44.94
CDX70601	Canola	extracellular	45.19	44.34
CDX80222	Canola	extracellular	38.46	43.48
CDX85557	Canola	extracellular	44.23	43.4
CDX91001	Canola	extracellular	44.23	43.4
CDY72009	Canola	extracellular	36.54	43.18
Solyc06g007890.2.1	Tomato	extracellular	38.46	42.55
CDY41324	Canola	cytosol	45.19	42.34
PGSC0003DMT400003086	Potato	extracellular	37.5	41.49
CDX93402	Canola	endoplasmic reticulum, extracellular	35.58	39.36
CDY22221	Canola	extracellular	47.12	38.28
CDY00909	Canola	extracellular	43.27	37.82
CDY60168	Canola	extracellular	43.27	37.5
CDX89647	Canola	extracellular	36.54	35.85
CDX93153	Canola	extracellular	36.54	35.85
CDY52417	Canola	extracellular	36.54	35.19
CDY22975	Canola	extracellular	32.69	35.05
CDY54472	Canola	extracellular	36.54	34.86
CDY50148	Canola	extracellular	31.73	34.38
CDX78620	Canola	cytosol	45.19	33.57

Protein Annotations

EnsemblPlants:CDY46336	EnsemblPlantsGene:GSBRNA2T00083749001	InterPro:GASA	PANTHER:PTHR23201	PANTHER:PTHR23201:SF1	PFAM:PF02704
ProteinID:CDY46336	ProteinID:CDY46336.1	SEG:seg	SignalP:SignalP-noTM	UniParc:UPI0004EE6211	UniProt:A0A078I8X6
MapMan:11.10.2.1.1	:	:	:	:	:

Description

BnaC01g30340DBnaC01g30340D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I8X6]

Coordinates

chrLK032662:+:30507..31220

Molecular Weight (calculated)

11366.4 Da

IEP (calculated)

6.441

GRAVY (calculated)

-0.280

Length

104 amino acids

Sequence
(BLAST)

001: MTKFITVWIV FSFLFATQFS NANELENSSE SIHTEGGEGS VKIGDCPAAC DVRCSATSHK SACLMYCNQC CKKCLCVPSG TYGNKEECPC YNNWKTQEGG
101: PKCP

Best Arabidopsis Sequence Match ( AT2G30810.1 )
(BLAST)

001: MMKLIVVFVI SSLLFATQFS NGDELESQAQ APAIHKNGGE GSLKPEECPK ACEYRCSATS HRKPCLFFCN KCCNKCLCVP SGTYGHKEEC PCYNNWTTKE
101: GGPKCP

Arabidopsis Description

GASA12Gibberellin-regulated protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q6GKX7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.