Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 4
- nucleus 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0189g00060.t01 | Wine grape | cytosol, extracellular, nucleus | 57.75 | 64.06 |
| TraesCS1A01G381700.1 | Wheat | cytosol | 67.61 | 61.54 |
| GSMUA_Achr11P... | Banana | cytosol | 61.97 | 60.27 |
| CDY14668 | Canola | cytosol | 57.75 | 55.41 |
| TraesCS1D01G389400.1 | Wheat | extracellular | 71.83 | 49.51 |
| TraesCS1A01G381600.1 | Wheat | extracellular | 71.83 | 49.51 |
| TraesCS1B01G404100.1 | Wheat | extracellular | 70.42 | 48.54 |
| VIT_00s0189g00070.t01 | Wine grape | endoplasmic reticulum, extracellular | 59.15 | 48.28 |
| KRG97330 | Soybean | extracellular | 59.15 | 45.65 |
| KRH18120 | Soybean | extracellular | 59.15 | 45.16 |
| KRH18123 | Soybean | extracellular | 59.15 | 45.16 |
| KXG38749 | Sorghum | extracellular | 66.2 | 44.76 |
| HORVU1Hr1G084230.1 | Barley | extracellular | 70.42 | 44.25 |
| CDY46336 | Canola | extracellular | 64.79 | 44.23 |
| Solyc06g007920.1.1 | Tomato | cytosol | 52.11 | 44.05 |
| Zm00001d030236_P001 | Maize | extracellular | 64.79 | 43.81 |
| CDY27104 | Canola | extracellular | 64.79 | 43.81 |
| CDY18069 | Canola | extracellular | 63.38 | 43.27 |
| AT2G30810.1 | Thale cress | extracellular | 61.97 | 41.51 |
| Os03t0760800-01 | Rice | extracellular | 50.7 | 38.71 |
| Os06t0266800-02 | Rice | extracellular | 57.75 | 37.27 |
| PGSC0003DMT400003089 | Potato | extracellular | 49.3 | 37.23 |
| Solyc06g007910.2.1 | Tomato | extracellular, nucleus | 49.3 | 37.23 |
| Os09t0414900-01 | Rice | extracellular | 54.93 | 34.82 |
| Solyc06g007890.2.1 | Tomato | extracellular | 45.07 | 34.04 |
| PGSC0003DMT400003086 | Potato | extracellular | 43.66 | 32.98 |
| Os05t0376800-01 | Rice | extracellular | 52.11 | 24.34 |
Protein Annotations
| EnsemblPlants:Os10t0115550-00 | EnsemblPlantsGene:Os10g0115550 | InterPro:GASA | PANTHER:PTHR23201 | PANTHER:PTHR23201:SF1 | PFAM:PF02704 |
| ProteinID:BAT09657.1 | SignalP:SignalP-noTM | UniParc:UPI000393BE0E | UniProt:A0A0P0XRU0 | MapMan:11.10.2.1.1 | : |
Description
Similar to gibberellin-regulated family protein. (Os10t0115550-00)
Coordinates
chr10:+:1005275..1005519
Molecular Weight (calculated)
8016.8 Da
IEP (calculated)
7.735
GRAVY (calculated)
-0.090
Length
71 amino acids
Sequence
(BLAST)
(BLAST)
1: IYIVFLFVLC VECPGKCSYR CSATSHTTVC MTYCNYCCER CLCVPSGTYG NKEECPCYNN MKTQEGKPKC P
001: MAKSYGAIFL LTLIVLFMLQ TMVMASSGSN VKWSQKRYGP GSLKRTQCPS ECDRRCKKTQ YHKACITFCN KCCRKCLCVP PGYYGNKQVC SCYNNWKTQE
101: GGPKCP
101: GGPKCP
Arabidopsis Description
GASA4Gibberellin-regulated protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P46690]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.