Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 6
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400003086 | Potato | extracellular | 98.94 | 98.94 |
| Solyc06g007910.2.1 | Tomato | extracellular, nucleus | 62.77 | 62.77 |
| Solyc06g007920.1.1 | Tomato | cytosol | 54.26 | 60.71 |
| CDY14668 | Canola | cytosol | 40.43 | 51.35 |
| Solyc04g078200.2.1 | Tomato | extracellular | 35.11 | 50.77 |
| GSMUA_Achr11P... | Banana | cytosol | 37.23 | 47.95 |
| TraesCS1A01G381700.1 | Wheat | cytosol | 39.36 | 47.44 |
| Solyc12g042500.1.1 | Tomato | extracellular | 42.55 | 45.45 |
| Os10t0115550-00 | Rice | endoplasmic reticulum, extracellular | 34.04 | 45.07 |
| VIT_00s0189g00060.t01 | Wine grape | cytosol, extracellular, nucleus | 29.79 | 43.75 |
| Solyc12g042520.1.1 | Tomato | extracellular | 40.43 | 43.18 |
| Solyc11g011210.1.1 | Tomato | extracellular | 43.62 | 42.71 |
| VIT_00s0189g00070.t01 | Wine grape | endoplasmic reticulum, extracellular | 39.36 | 42.53 |
| Solyc01g107370.2.1 | Tomato | extracellular | 39.36 | 41.57 |
| Solyc08g005620.2.1 | Tomato | extracellular | 39.36 | 41.57 |
| KRH18123 | Soybean | extracellular | 40.43 | 40.86 |
| KRH18120 | Soybean | extracellular | 40.43 | 40.86 |
| KRG97330 | Soybean | extracellular | 39.36 | 40.22 |
| TraesCS1D01G389400.1 | Wheat | extracellular | 43.62 | 39.81 |
| TraesCS1A01G381600.1 | Wheat | extracellular | 43.62 | 39.81 |
| CDY18069 | Canola | extracellular | 43.62 | 39.42 |
| CDY27104 | Canola | extracellular | 43.62 | 39.05 |
| TraesCS1B01G404100.1 | Wheat | extracellular | 42.55 | 38.84 |
| CDY46336 | Canola | extracellular | 42.55 | 38.46 |
| Zm00001d030236_P001 | Maize | extracellular | 42.55 | 38.1 |
| Solyc03g116060.2.1 | Tomato | extracellular | 41.49 | 37.5 |
| KXG38749 | Sorghum | extracellular | 41.49 | 37.14 |
| AT2G30810.1 | Thale cress | extracellular | 41.49 | 36.79 |
| Solyc06g069790.2.1 | Tomato | extracellular | 40.43 | 36.54 |
| HORVU1Hr1G084230.1 | Barley | extracellular | 39.36 | 32.74 |
| Solyc02g089350.2.1 | Tomato | nucleus | 38.3 | 32.14 |
| Solyc04g017720.2.1 | Tomato | extracellular | 38.3 | 31.58 |
Protein Annotations
| EnsemblPlants:Solyc06g007890.2.1 | EnsemblPlantsGene:Solyc06g007890.2 | InterPro:GASA | PANTHER:PTHR23201 | PANTHER:PTHR23201:SF40 | PFAM:PF02704 |
| SignalP:SignalP-noTM | UniParc:UPI0001D6B089 | UniProt:K4C3G9 | MapMan:11.10.2.1.1 | : | : |
Description
No Description!
Coordinates
chr6:+:1784223..1785855
Molecular Weight (calculated)
10638.1 Da
IEP (calculated)
8.441
GRAVY (calculated)
-0.410
Length
94 amino acids
Sequence
(BLAST)
(BLAST)
1: MRLLHIFLAL LIMASMSRAQ PPVGPTTCPV PKDKCEEACN VRCSQKGHKK RCLFYCNHCC GWCQCVPPGY VGENKDCCPC YRDWKKQTGE PKCP
001: MAKSYGAIFL LTLIVLFMLQ TMVMASSGSN VKWSQKRYGP GSLKRTQCPS ECDRRCKKTQ YHKACITFCN KCCRKCLCVP PGYYGNKQVC SCYNNWKTQE
101: GGPKCP
101: GGPKCP
Arabidopsis Description
GASA4Gibberellin-regulated protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P46690]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.