Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 6
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g007890.2.1 | Tomato | extracellular | 98.94 | 98.94 |
| PGSC0003DMT400003089 | Potato | extracellular | 61.7 | 61.7 |
| CDY14668 | Canola | cytosol | 41.49 | 52.7 |
| GSMUA_Achr11P... | Banana | cytosol | 38.3 | 49.32 |
| TraesCS1A01G381700.1 | Wheat | cytosol | 38.3 | 46.15 |
| VIT_00s0189g00060.t01 | Wine grape | cytosol, extracellular, nucleus | 30.85 | 45.31 |
| PGSC0003DMT400037423 | Potato | extracellular | 41.49 | 44.32 |
| VIT_00s0189g00070.t01 | Wine grape | endoplasmic reticulum, extracellular | 40.43 | 43.68 |
| Os10t0115550-00 | Rice | endoplasmic reticulum, extracellular | 32.98 | 43.66 |
| PGSC0003DMT400055426 | Potato | extracellular | 39.36 | 42.05 |
| KRH18120 | Soybean | extracellular | 41.49 | 41.94 |
| KRH18123 | Soybean | extracellular | 41.49 | 41.94 |
| KRG97330 | Soybean | extracellular | 40.43 | 41.3 |
| PGSC0003DMT400040585 | Potato | extracellular | 41.49 | 40.62 |
| PGSC0003DMT400066182 | Potato | extracellular | 38.3 | 40.45 |
| CDY27104 | Canola | extracellular | 44.68 | 40.0 |
| PGSC0003DMT400047535 | Potato | extracellular | 37.23 | 39.33 |
| TraesCS1D01G389400.1 | Wheat | extracellular | 42.55 | 38.84 |
| TraesCS1A01G381600.1 | Wheat | extracellular | 42.55 | 38.84 |
| CDY18069 | Canola | extracellular | 42.55 | 38.46 |
| TraesCS1B01G404100.1 | Wheat | extracellular | 41.49 | 37.86 |
| AT2G30810.1 | Thale cress | extracellular | 42.55 | 37.74 |
| CDY46336 | Canola | extracellular | 41.49 | 37.5 |
| Zm00001d030236_P001 | Maize | extracellular | 41.49 | 37.14 |
| PGSC0003DMT400083077 | Potato | extracellular | 40.43 | 36.89 |
| KXG38749 | Sorghum | extracellular | 40.43 | 36.19 |
| PGSC0003DMT400050285 | Potato | extracellular | 39.36 | 35.58 |
| HORVU1Hr1G084230.1 | Barley | extracellular | 38.3 | 31.86 |
| PGSC0003DMT400019726 | Potato | extracellular | 38.3 | 31.58 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400003086 | EnsemblPlantsGene:PGSC0003DMG400001226 | InterPro:GASA | PANTHER:PTHR23201 | PANTHER:PTHR23201:SF40 | PFAM:PF02704 |
| PGSC:PGSC0003DMG400001226 | SignalP:SignalP-noTM | UniParc:UPI000296369D | UniProt:M0ZL45 | MapMan:11.10.2.1.1 | : |
Description
Gibberellin regulated protein [Source:PGSC_GENE;Acc:PGSC0003DMG400001226]
Coordinates
chr6:-:2190178..2192234
Molecular Weight (calculated)
10661.2 Da
IEP (calculated)
8.442
GRAVY (calculated)
-0.406
Length
94 amino acids
Sequence
(BLAST)
(BLAST)
1: MRLLHIFLAL LIMASMSRAQ PPVGPTTCPV PKDKCEEACN VRCSQKGHKK RCLFYCNHCC GWCQCVPPGY VGEHKDCCPC YRDWKKQTGE PKCP
1: MKLVVVQFFI ISLLLTSSFS VLSSADSSCG GKCNVRCSKA GQHEECLKYC NICCQKCNCV PSGTFGHKDE CPCYRDMKNS KGGSKCP
Arabidopsis Description
Gibberellin-regulated protein 8 [Source:UniProtKB/Swiss-Prot;Acc:O80641]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.