Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- golgi 6
- plasma membrane 5
- endoplasmic reticulum 5
- vacuole 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400040585 | Potato | extracellular | 96.88 | 96.88 |
| KRH17367 | Soybean | endoplasmic reticulum, extracellular | 70.83 | 70.1 |
| KRH73005 | Soybean | endoplasmic reticulum, extracellular | 69.79 | 69.07 |
| Bra021407.1-P | Field mustard | extracellular | 62.5 | 62.5 |
| AT3G02885.1 | Thale cress | extracellular | 59.38 | 58.76 |
| Solyc03g116060.2.1 | Tomato | extracellular | 56.25 | 51.92 |
| Solyc02g089350.2.1 | Tomato | nucleus | 59.38 | 50.89 |
| Solyc06g069790.2.1 | Tomato | extracellular | 54.17 | 50.0 |
| Solyc04g017720.2.1 | Tomato | extracellular | 58.33 | 49.12 |
| Solyc06g007920.1.1 | Tomato | cytosol | 41.67 | 47.62 |
| Solyc06g007890.2.1 | Tomato | extracellular | 42.71 | 43.62 |
| Solyc04g078200.2.1 | Tomato | extracellular | 29.17 | 43.08 |
| Solyc06g007910.2.1 | Tomato | extracellular, nucleus | 41.67 | 42.55 |
| Solyc01g107370.2.1 | Tomato | extracellular | 36.46 | 39.33 |
| Solyc08g005620.2.1 | Tomato | extracellular | 34.38 | 37.08 |
| Solyc12g042500.1.1 | Tomato | extracellular | 33.33 | 36.36 |
| Solyc12g042520.1.1 | Tomato | extracellular | 31.25 | 34.09 |
Protein Annotations
| MapMan:11.10.2.1.1 | InterPro:GASA | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0009408 | GO:GO:0009506 | GO:GO:0009628 | GO:GO:0009719 | GO:GO:0009751 | GO:GO:0010286 |
| EMBL:L22188 | EMBL:L22189 | UniProt:P47926 | PFAM:PF02704 | PANTHER:PTHR23201 | PANTHER:PTHR23201:SF24 |
| SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc11g011210.1 | EnsemblPlants:Solyc11g011210.1.1 | TMHMM:TMhelix | UniParc:UPI000004A1C3 | SEG:seg |
Description
RSI-1Protein RSI-1 [Source:UniProtKB/Swiss-Prot;Acc:P47926]
Coordinates
chr11:-:4263748..4264776
Molecular Weight (calculated)
10839.4 Da
IEP (calculated)
9.097
GRAVY (calculated)
-0.197
Length
96 amino acids
Sequence
(BLAST)
(BLAST)
1: MAKSGYNASF LLLISMFLIL LTFSNVVEGY NKLRPTDCKP RCTYRCSATS HKKPCMFFCQ KCCATCLCVP KGVYGNKQSC PCYNNWKTQE GKPKCP
001: MAKLITSFLL LTILFTFVCL TMSKEAEYHP ESYGPGSLKS YQCGGQCTRR CSNTKYHKPC MFFCQKCCAK CLCVPPGTYG NKQVCPCYNN WKTQQGGPKC
101: P
101: P
Arabidopsis Description
GASA6Gibberellin-regulated protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q6NMQ7]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.