Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 8
- plastid 1
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021407.1-P | Field mustard | extracellular | 78.35 | 79.17 |
| KRH73005 | Soybean | endoplasmic reticulum, extracellular | 63.92 | 63.92 |
| KRH17367 | Soybean | endoplasmic reticulum, extracellular | 62.89 | 62.89 |
| PGSC0003DMT400040585 | Potato | extracellular | 59.79 | 60.42 |
| Solyc11g011210.1.1 | Tomato | extracellular | 58.76 | 59.38 |
| AT1G74670.1 | Thale cress | extracellular | 57.73 | 55.45 |
| AT2G30810.1 | Thale cress | extracellular | 55.67 | 50.94 |
| AT5G15230.1 | Thale cress | extracellular | 51.55 | 47.17 |
| AT3G10185.1 | Thale cress | endoplasmic reticulum, extracellular | 57.73 | 45.9 |
| AT5G59845.1 | Thale cress | extracellular | 36.08 | 39.33 |
| AT2G39540.1 | Thale cress | extracellular | 35.05 | 39.08 |
| AT1G10588.1 | Thale cress | extracellular | 36.08 | 38.89 |
| AT2G14900.1 | Thale cress | extracellular | 36.08 | 32.41 |
Protein Annotations
| MapMan:11.10.2.1.1 | EntrezGene:821194 | EMBL:AC018363 | ProteinID:AEE73874.1 | ArrayExpress:AT3G02885 | EnsemblPlantsGene:AT3G02885 |
| RefSeq:AT3G02885 | TAIR:AT3G02885 | RefSeq:AT3G02885-TAIR-G | EnsemblPlants:AT3G02885.1 | TAIR:AT3G02885.1 | EMBL:BT002786 |
| EMBL:BT004355 | InterPro:GASA | Symbol:GASA5 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005578 |
| GO:GO:0005618 | GO:GO:0005623 | GO:GO:0006950 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0009408 | GO:GO:0009506 | GO:GO:0009628 | GO:GO:0009719 | GO:GO:0009740 | GO:GO:0009751 |
| GO:GO:0009987 | GO:GO:0010286 | GO:GO:0030312 | GO:GO:0031012 | RefSeq:NP_566186.1 | PFAM:PF02704 |
| PO:PO:0001185 | PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009009 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009031 | PO:PO:0009046 | PO:PO:0020100 | PANTHER:PTHR23201 |
| PANTHER:PTHR23201:SF24 | UniProt:Q84J95 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000000BDC3 | SEG:seg |
Description
GASA5Gibberellin-regulated protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q84J95]
Coordinates
chr3:-:637921..639178
Molecular Weight (calculated)
10845.6 Da
IEP (calculated)
10.068
GRAVY (calculated)
-0.192
Length
97 amino acids
Sequence
(BLAST)
(BLAST)
1: MANCIRRNAL FFLTLLFLLS VSNLVQAARG GGKLKPQQCN SKCSFRCSAT SHKKPCMFFC LKCCKKCLCV PPGTFGNKQT CPCYNNWKTK EGRPKCP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.