Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 8
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G39540.1 | Thale cress | extracellular | 85.56 | 88.51 |
| CDY20958 | Canola | extracellular | 76.67 | 78.41 |
| CDY20617 | Canola | extracellular | 76.67 | 78.41 |
| CDY72009 | Canola | extracellular | 73.33 | 75.0 |
| Bra019917.1-P | Field mustard | cytosol | 54.44 | 74.24 |
| AT5G59845.1 | Thale cress | extracellular | 71.11 | 71.91 |
| CDX93402 | Canola | endoplasmic reticulum, extracellular | 73.33 | 70.21 |
| GSMUA_Achr6P07810_001 | Banana | cytosol | 33.33 | 63.83 |
| KRH35705 | Soybean | extracellular | 56.67 | 56.67 |
| VIT_03s0091g00390.t01 | Wine grape | extracellular | 54.44 | 55.68 |
| KRG91068 | Soybean | extracellular | 54.44 | 54.44 |
| Os03t0760800-01 | Rice | extracellular | 55.56 | 53.76 |
| TraesCS5A01G398500.1 | Wheat | extracellular | 54.44 | 52.13 |
| TraesCS5B01G403500.1 | Wheat | extracellular | 54.44 | 52.13 |
| TraesCS5D01G408000.1 | Wheat | extracellular | 54.44 | 52.13 |
| Zm00001d013222_P001 | Maize | extracellular | 55.56 | 52.08 |
| GSMUA_Achr6P02260_001 | Banana | extracellular | 52.22 | 51.65 |
| EER90847 | Sorghum | extracellular | 53.33 | 51.61 |
| GSMUA_Achr5P16080_001 | Banana | extracellular | 44.44 | 51.28 |
| GSMUA_Achr10P... | Banana | extracellular | 51.11 | 50.55 |
| TraesCS5A01G398600.1 | Wheat | endoplasmic reticulum, extracellular | 52.22 | 48.96 |
| GSMUA_Achr10P... | Banana | extracellular | 50.0 | 48.91 |
| GSMUA_Achr6P11160_001 | Banana | extracellular | 48.89 | 48.35 |
| TraesCS5B01G403600.1 | Wheat | endoplasmic reticulum, extracellular | 51.11 | 46.94 |
| TraesCS5D01G408100.1 | Wheat | endoplasmic reticulum, extracellular | 50.0 | 45.92 |
| TraesCS5A01G398700.1 | Wheat | endoplasmic reticulum, extracellular | 47.78 | 43.88 |
| AT2G14900.1 | Thale cress | extracellular | 50.0 | 41.67 |
| AT1G74670.1 | Thale cress | extracellular | 43.33 | 38.61 |
| AT2G30810.1 | Thale cress | extracellular | 44.44 | 37.74 |
| AT3G02885.1 | Thale cress | extracellular | 38.89 | 36.08 |
| AT3G10185.1 | Thale cress | endoplasmic reticulum, extracellular | 42.22 | 31.15 |
| AT5G15230.1 | Thale cress | extracellular | 36.67 | 31.13 |
Protein Annotations
| ArrayExpress:AT1G10588 | EMBL:DQ492244 | EnsemblPlants:AT1G10588.1 | EnsemblPlantsGene:AT1G10588 | EntrezGene:5007675 | EntrezGene:818539 |
| InterPro:GASA | PANTHER:PTHR23201 | PANTHER:PTHR23201:SF10 | PFAM:PF02704 | ProteinID:AEE28601.1 | RefSeq:AT1G10588 |
| RefSeq:AT1G10588-TAIR-G | RefSeq:NP_001077503.1 | SignalP:SignalP-noTM | TAIR:AT1G10588 | TAIR:AT1G10588.1 | TMHMM:TMhelix |
| UniParc:UPI0000D7C8F3 | UniProt:Q1G2Y4 | MapMan:11.10.2.1.1 | : | : | : |
Description
Gibberellin-regulated family protein [Source:UniProtKB/TrEMBL;Acc:Q1G2Y4]
Coordinates
chr1:+:3501202..3501904
Molecular Weight (calculated)
9809.8 Da
IEP (calculated)
7.468
GRAVY (calculated)
-0.196
Length
90 amino acids
Sequence
(BLAST)
(BLAST)
1: MKMPVVVQFF IISLLLTSSF YVLSSADSSA CGGKCSVRCS KADRTHEECL EDCDICCQKC NCVPSGTYGN KDECPCYRDM KNSKGGSKCP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.