Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 8
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra008162.1-P | Field mustard | extracellular | 89.11 | 89.11 |
| CDY71845 | Canola | extracellular | 88.12 | 88.12 |
| VIT_17s0000g06210.t01 | Wine grape | extracellular | 65.35 | 63.46 |
| PGSC0003DMT400083077 | Potato | extracellular | 63.37 | 62.14 |
| Solyc06g069790.2.1 | Tomato | extracellular | 63.37 | 61.54 |
| VIT_14s0108g00740.t01 | Wine grape | extracellular | 62.38 | 59.43 |
| Solyc03g116060.2.1 | Tomato | extracellular | 60.4 | 58.65 |
| AT3G02885.1 | Thale cress | extracellular | 55.45 | 57.73 |
| PGSC0003DMT400050285 | Potato | extracellular | 59.41 | 57.69 |
| AT5G15230.1 | Thale cress | extracellular | 60.4 | 57.55 |
| KRG93532 | Soybean | extracellular | 62.38 | 57.27 |
| GSMUA_Achr6P02710_001 | Banana | extracellular | 61.39 | 56.88 |
| GSMUA_Achr7P18070_001 | Banana | extracellular | 61.39 | 56.88 |
| KRH63343 | Soybean | extracellular | 59.41 | 56.6 |
| KRH54552 | Soybean | extracellular | 59.41 | 56.6 |
| TraesCS7D01G210500.1 | Wheat | extracellular | 52.48 | 56.38 |
| KRH40097 | Soybean | extracellular | 59.41 | 56.07 |
| KRH01173 | Soybean | extracellular | 59.41 | 56.07 |
| TraesCS7B01G115300.1 | Wheat | extracellular | 54.46 | 55.56 |
| TraesCS7A01G208100.1 | Wheat | extracellular | 54.46 | 54.46 |
| OQU89489 | Sorghum | extracellular | 61.39 | 53.91 |
| Os09t0414900-01 | Rice | extracellular | 58.42 | 52.68 |
| Os06t0266800-02 | Rice | extracellular | 56.44 | 51.82 |
| HORVU5Hr1G065670.1 | Barley | extracellular | 54.46 | 48.67 |
| TraesCS5A01G227000.1 | Wheat | extracellular | 53.47 | 48.21 |
| AT2G30810.1 | Thale cress | extracellular | 50.49 | 48.11 |
| TraesCS5D01G234400.1 | Wheat | extracellular | 52.48 | 47.75 |
| TraesCS5B01G225600.1 | Wheat | extracellular | 52.48 | 47.32 |
| AT3G10185.1 | Thale cress | endoplasmic reticulum, extracellular | 54.46 | 45.08 |
| EER89583 | Sorghum | extracellular | 50.49 | 44.74 |
| EES16564 | Sorghum | extracellular | 55.45 | 44.09 |
| Zm00001d023290_P001 | Maize | extracellular | 55.45 | 43.41 |
| AT1G10588.1 | Thale cress | extracellular | 38.61 | 43.33 |
| AT2G39540.1 | Thale cress | extracellular | 36.63 | 42.53 |
| AT5G59845.1 | Thale cress | extracellular | 36.63 | 41.57 |
| OQU77894 | Sorghum | extracellular | 51.49 | 37.96 |
| Zm00001d038056_P001 | Maize | extracellular | 52.48 | 36.55 |
| Os05t0376800-01 | Rice | extracellular | 54.46 | 36.18 |
| AT2G14900.1 | Thale cress | extracellular | 30.69 | 28.7 |
| HORVU7Hr1G042390.2 | Barley | cytosol | 45.54 | 19.09 |
Protein Annotations
| MapMan:11.10.2.1.1 | EntrezGene:843806 | ProteinID:AAG52379.1 | ProteinID:AEE35620.1 | ArrayExpress:AT1G74670 | EnsemblPlantsGene:AT1G74670 |
| RefSeq:AT1G74670 | TAIR:AT1G74670 | RefSeq:AT1G74670-TAIR-G | EnsemblPlants:AT1G74670.1 | TAIR:AT1G74670.1 | EMBL:BT011599 |
| InterPro:GASA | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0009628 | GO:GO:0009719 | GO:GO:0009740 | GO:GO:0009744 | GO:GO:0009749 | GO:GO:0009750 |
| GO:GO:0009987 | GO:GO:0080167 | RefSeq:NP_177605.2 | PFAM:PF02704 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR23201 | PANTHER:PTHR23201:SF22 | UniProt:Q6NMQ7 |
| SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0000197198 | SEG:seg | : | : |
Description
GASA6Gibberellin-regulated protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q6NMQ7]
Coordinates
chr1:+:28053030..28054149
Molecular Weight (calculated)
11342.0 Da
IEP (calculated)
8.721
GRAVY (calculated)
-0.251
Length
101 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKLITSFLL LTILFTFVCL TMSKEAEYHP ESYGPGSLKS YQCGGQCTRR CSNTKYHKPC MFFCQKCCAK CLCVPPGTYG NKQVCPCYNN WKTQQGGPKC
101: P
101: P
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.