Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 5
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY41324 | Canola | cytosol | 77.05 | 84.68 |
| CDY00909 | Canola | extracellular | 81.97 | 84.03 |
| CDY60168 | Canola | extracellular | 80.33 | 81.67 |
| CDY22221 | Canola | extracellular | 84.43 | 80.47 |
| PGSC0003DMT400019726 | Potato | extracellular | 61.48 | 65.79 |
| VIT_08s0007g05860.t01 | Wine grape | extracellular | 60.66 | 64.91 |
| Solyc04g017720.2.1 | Tomato | extracellular | 60.66 | 64.91 |
| KRH66831 | Soybean | extracellular | 65.57 | 57.97 |
| AT3G02885.1 | Thale cress | extracellular | 45.9 | 57.73 |
| KRG95149 | Soybean | extracellular | 64.75 | 57.66 |
| AT1G74670.1 | Thale cress | extracellular | 45.08 | 54.46 |
| AT2G30810.1 | Thale cress | extracellular | 43.44 | 50.0 |
| AT5G15230.1 | Thale cress | extracellular | 41.8 | 48.11 |
| AT2G39540.1 | Thale cress | extracellular | 31.15 | 43.68 |
| AT5G59845.1 | Thale cress | extracellular | 31.15 | 42.7 |
| AT1G10588.1 | Thale cress | extracellular | 31.15 | 42.22 |
| AT2G14900.1 | Thale cress | extracellular | 31.15 | 35.19 |
Protein Annotations
| MapMan:11.10.2.1.1 | EntrezGene:5007990 | UniProt:A0A2H1ZEH3 | ProteinID:AEE74867.2 | ArrayExpress:AT3G10185 | EnsemblPlantsGene:AT3G10185 |
| RefSeq:AT3G10185 | TAIR:AT3G10185 | RefSeq:AT3G10185-TAIR-G | EnsemblPlants:AT3G10185.1 | TAIR:AT3G10185.1 | InterPro:GASA |
| GO:GO:0005575 | GO:GO:0005576 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009719 |
| GO:GO:0009740 | GO:GO:0009987 | RefSeq:NP_001319515.1 | PFAM:PF02704 | PANTHER:PTHR23201 | PANTHER:PTHR23201:SF8 |
| SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0008484C97 | SEG:seg | : | : |
Description
Gibberellin-regulated family protein [Source:TAIR;Acc:AT3G10185]
Coordinates
chr3:+:3145526..3146283
Molecular Weight (calculated)
13562.5 Da
IEP (calculated)
8.812
GRAVY (calculated)
-0.516
Length
122 amino acids
Sequence
(BLAST)
(BLAST)
001: MATKLSIIVF SIVVLHLLLS AHMHPIYLES PARQPQPPQS QPQLPHHNNS QYGTTQGSLQ PQECGPRCGD RCSNTQYKKP CLFFCNKCCN KCLCVPPGTY
101: GNKQVCPCYN NWKTKSGGPK CP
101: GNKQVCPCYN NWKTKSGGPK CP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.