Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
- cytosol 2
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY22221 | Canola | extracellular | 96.4 | 83.59 |
| CDY00909 | Canola | extracellular | 82.88 | 77.31 |
| AT3G10185.1 | Thale cress | endoplasmic reticulum, extracellular | 84.68 | 77.05 |
| CDY60168 | Canola | extracellular | 82.88 | 76.67 |
| CDY14668 | Canola | cytosol | 41.44 | 62.16 |
| Solyc04g017720.2.1 | Tomato | extracellular | 61.26 | 59.65 |
| PGSC0003DMT400019726 | Potato | extracellular | 61.26 | 59.65 |
| VIT_08s0007g05860.t01 | Wine grape | extracellular | 60.36 | 58.77 |
| CDY71845 | Canola | extracellular | 49.55 | 54.46 |
| KRG95149 | Soybean | extracellular | 66.67 | 54.01 |
| KRH66831 | Soybean | extracellular | 66.67 | 53.62 |
| CDY18069 | Canola | extracellular | 43.24 | 46.15 |
| CDX70601 | Canola | extracellular | 43.24 | 45.28 |
| CDX91001 | Canola | extracellular | 43.24 | 45.28 |
| CDX85557 | Canola | extracellular | 43.24 | 45.28 |
| CDY46336 | Canola | extracellular | 42.34 | 45.19 |
| CDY27104 | Canola | extracellular | 42.34 | 44.76 |
| CDY20617 | Canola | extracellular | 33.33 | 42.05 |
| CDY20958 | Canola | extracellular | 33.33 | 42.05 |
| CDX71072 | Canola | extracellular | 32.43 | 39.56 |
| CDX88727 | Canola | extracellular | 31.53 | 38.46 |
| CDY09248 | Canola | extracellular | 30.63 | 38.2 |
| CDY31590 | Canola | extracellular | 30.63 | 36.96 |
| CDY31591 | Canola | extracellular | 30.63 | 36.96 |
| CDX80223 | Canola | extracellular | 30.63 | 36.96 |
| CDY72009 | Canola | extracellular | 28.83 | 36.36 |
| CDX80222 | Canola | extracellular | 29.73 | 35.87 |
| CDX78620 | Canola | cytosol | 43.24 | 34.29 |
| CDX93402 | Canola | endoplasmic reticulum, extracellular | 28.83 | 34.04 |
| CDY54472 | Canola | extracellular | 32.43 | 33.03 |
| CDX93153 | Canola | extracellular | 31.53 | 33.02 |
| CDY52417 | Canola | extracellular | 31.53 | 32.41 |
| CDX89647 | Canola | extracellular | 30.63 | 32.08 |
| CDY22975 | Canola | extracellular | 27.03 | 30.93 |
| CDY50148 | Canola | extracellular | 25.23 | 29.17 |
Protein Annotations
| EnsemblPlants:CDY41324 | EnsemblPlantsGene:GSBRNA2T00072876001 | InterPro:GASA | PANTHER:PTHR23201 | PANTHER:PTHR23201:SF8 | PFAM:PF02704 |
| ProteinID:CDY41324 | ProteinID:CDY41324.1 | SEG:seg | UniParc:UPI0004EEBAC3 | UniProt:A0A078HVD4 | MapMan:11.10.2.1.1 |
Description
BnaA01g31950DBnaA01g31950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HVD4]
Coordinates
chrLK032495:+:119903..120843
Molecular Weight (calculated)
12276.7 Da
IEP (calculated)
8.432
GRAVY (calculated)
-0.786
Length
111 amino acids
Sequence
(BLAST)
(BLAST)
001: MFHLVLSAQT QMHPIHLESP APQPHPPQSQ PQTPNHNSSQ YGTTEGSLQP QECGPRCGDR CSNTKYKKPC LFFCNKCCAK CLCVPPGTYG NKQVCPCYNN
101: WKTQLGGPKC P
101: WKTQLGGPKC P
001: MATKLSIIVF SIVVLHLLLS AHMHPIYLES PARQPQPPQS QPQLPHHNNS QYGTTQGSLQ PQECGPRCGD RCSNTQYKKP CLFFCNKCCN KCLCVPPGTY
101: GNKQVCPCYN NWKTKSGGPK CP
101: GNKQVCPCYN NWKTKSGGPK CP
Arabidopsis Description
Gibberellin-regulated family protein [Source:TAIR;Acc:AT3G10185]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.