Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra008162.1-P | Field mustard | extracellular | 99.01 | 99.01 |
| AT1G74670.1 | Thale cress | extracellular | 88.12 | 88.12 |
| CDY14668 | Canola | cytosol | 45.54 | 62.16 |
| VIT_17s0000g06210.t01 | Wine grape | extracellular | 60.4 | 58.65 |
| PGSC0003DMT400083077 | Potato | extracellular | 59.41 | 58.25 |
| Solyc06g069790.2.1 | Tomato | extracellular | 59.41 | 57.69 |
| Solyc03g116060.2.1 | Tomato | extracellular | 58.42 | 56.73 |
| PGSC0003DMT400050285 | Potato | extracellular | 57.43 | 55.77 |
| KRH54552 | Soybean | extracellular | 58.42 | 55.66 |
| VIT_14s0108g00740.t01 | Wine grape | extracellular | 57.43 | 54.72 |
| KRG93532 | Soybean | extracellular | 59.41 | 54.55 |
| TraesCS7D01G210500.1 | Wheat | extracellular | 50.49 | 54.26 |
| CDX85557 | Canola | extracellular | 56.44 | 53.77 |
| CDX91001 | Canola | extracellular | 56.44 | 53.77 |
| KRH63343 | Soybean | extracellular | 56.44 | 53.77 |
| KRH40097 | Soybean | extracellular | 56.44 | 53.27 |
| KRH01173 | Soybean | extracellular | 56.44 | 53.27 |
| GSMUA_Achr7P18070_001 | Banana | extracellular | 57.43 | 53.21 |
| CDX70601 | Canola | extracellular | 55.45 | 52.83 |
| TraesCS7B01G115300.1 | Wheat | extracellular | 51.49 | 52.53 |
| GSMUA_Achr6P02710_001 | Banana | extracellular | 56.44 | 52.29 |
| OQU89489 | Sorghum | extracellular | 58.42 | 51.3 |
| Os09t0414900-01 | Rice | extracellular | 56.44 | 50.89 |
| TraesCS7A01G208100.1 | Wheat | extracellular | 50.49 | 50.49 |
| CDY41324 | Canola | cytosol | 54.46 | 49.55 |
| HORVU5Hr1G065670.1 | Barley | extracellular | 54.46 | 48.67 |
| Os06t0266800-02 | Rice | extracellular | 52.48 | 48.18 |
| CDY18069 | Canola | extracellular | 48.51 | 47.12 |
| TraesCS5A01G227000.1 | Wheat | extracellular | 51.49 | 46.43 |
| TraesCS5D01G234400.1 | Wheat | extracellular | 50.49 | 45.95 |
| TraesCS5B01G225600.1 | Wheat | extracellular | 50.49 | 45.54 |
| CDY20958 | Canola | extracellular | 39.6 | 45.45 |
| CDY20617 | Canola | extracellular | 39.6 | 45.45 |
| CDY22221 | Canola | extracellular | 57.43 | 45.31 |
| CDY46336 | Canola | extracellular | 46.53 | 45.19 |
| Zm00001d023290_P001 | Maize | extracellular | 57.43 | 44.96 |
| EES16564 | Sorghum | extracellular | 56.44 | 44.88 |
| CDY27104 | Canola | extracellular | 46.53 | 44.76 |
| CDY00909 | Canola | extracellular | 52.48 | 44.54 |
| CDY60168 | Canola | extracellular | 52.48 | 44.17 |
| CDX88727 | Canola | extracellular | 38.61 | 42.86 |
| CDX71072 | Canola | extracellular | 38.61 | 42.86 |
| EER89583 | Sorghum | extracellular | 47.52 | 42.11 |
| CDY72009 | Canola | extracellular | 36.63 | 42.05 |
| CDY31591 | Canola | extracellular | 37.62 | 41.3 |
| CDY31590 | Canola | extracellular | 37.62 | 41.3 |
| CDX93402 | Canola | endoplasmic reticulum, extracellular | 37.62 | 40.43 |
| CDX80223 | Canola | extracellular | 36.63 | 40.22 |
| CDY09248 | Canola | extracellular | 34.65 | 39.33 |
| CDX80222 | Canola | extracellular | 35.64 | 39.13 |
| OQU77894 | Sorghum | extracellular | 51.49 | 37.96 |
| CDX78620 | Canola | cytosol | 52.48 | 37.86 |
| Os05t0376800-01 | Rice | extracellular | 54.46 | 36.18 |
| Zm00001d038056_P001 | Maize | extracellular | 51.49 | 35.86 |
| CDY22975 | Canola | extracellular | 31.68 | 32.99 |
| CDY50148 | Canola | extracellular | 30.69 | 32.29 |
| CDX93153 | Canola | extracellular | 31.68 | 30.19 |
| CDX89647 | Canola | extracellular | 31.68 | 30.19 |
| CDY52417 | Canola | extracellular | 30.69 | 28.7 |
| CDY54472 | Canola | extracellular | 30.69 | 28.44 |
| HORVU7Hr1G042390.2 | Barley | cytosol | 46.53 | 19.5 |
Protein Annotations
| EnsemblPlants:CDY71845 | EnsemblPlantsGene:GSBRNA2T00020806001 | GO:GO:0008150 | GO:GO:0009628 | GO:GO:0009744 | GO:GO:0009749 |
| GO:GO:0009750 | GO:GO:0080167 | InterPro:GASA | PANTHER:PTHR23201 | PANTHER:PTHR23201:SF22 | PFAM:PF02704 |
| ProteinID:CDY71845 | ProteinID:CDY71845.1 | SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0004EE8624 |
| UniProt:A0A078JZQ7 | MapMan:11.10.2.1.1 | : | : | : | : |
Description
BnaAnng38970DGibberellin-regulated protein 6 [Source:Projected from Arabidopsis thaliana (AT1G74670) UniProtKB/Swiss-Prot;Acc:Q6NMQ7]
Coordinates
chrLK047779:+:1266..2101
Molecular Weight (calculated)
11430.0 Da
IEP (calculated)
8.544
GRAVY (calculated)
-0.235
Length
101 amino acids
Sequence
(BLAST)
(BLAST)
001: MANLITYLLF ITILFSFIFL TMSKETEYNP ESYGAGSLKS YQCGGECTRR CSNTKYHKPC MFFCQKCCAK CLCVPPGTYG NKQVCPCYNN WKTQQGGPKC
101: P
101: P
001: MAKLITSFLL LTILFTFVCL TMSKEAEYHP ESYGPGSLKS YQCGGQCTRR CSNTKYHKPC MFFCQKCCAK CLCVPPGTYG NKQVCPCYNN WKTQQGGPKC
101: P
101: P
Arabidopsis Description
GASA6Gibberellin-regulated protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q6NMQ7]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.