CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31591	Canola	extracellular	94.57	94.57
CDY31590	Canola	extracellular	92.39	92.39
CDX80222	Canola	extracellular	90.22	90.22
CDX71072	Canola	extracellular	85.87	86.81
CDX88727	Canola	extracellular	85.87	86.81
CDY09248	Canola	extracellular	82.61	85.39
AT5G59845.1	Thale cress	extracellular	77.17	79.78
CDY20958	Canola	extracellular	72.83	76.14
CDY20617	Canola	extracellular	72.83	76.14
CDY72009	Canola	extracellular	69.57	72.73
GSMUA_Achr6P07810_001	Banana	cytosol	35.87	70.21
CDX93402	Canola	endoplasmic reticulum, extracellular	66.3	64.89
KRG91068	Soybean	extracellular	59.78	61.11
KRH35705	Soybean	extracellular	59.78	61.11
GSMUA_Achr6P02260_001	Banana	extracellular	57.61	58.24
GSMUA_Achr5P16080_001	Banana	extracellular	48.91	57.69
VIT_03s0091g00390.t01	Wine grape	extracellular	54.35	56.82
TraesCS5D01G408000.1	Wheat	extracellular	57.61	56.38
Os03t0760800-01	Rice	extracellular	56.52	55.91
TraesCS5B01G403500.1	Wheat	extracellular	56.52	55.32
TraesCS5A01G398500.1	Wheat	extracellular	56.52	55.32
GSMUA_Achr6P11160_001	Banana	extracellular	54.35	54.95
TraesCS5A01G398600.1	Wheat	endoplasmic reticulum, extracellular	56.52	54.17
GSMUA_Achr10P...	Banana	extracellular	53.26	53.85
EER90847	Sorghum	extracellular	54.35	53.76
Zm00001d013222_P001	Maize	extracellular	55.43	53.12
CDY14668	Canola	cytosol	41.3	51.35
GSMUA_Achr10P...	Banana	extracellular	51.09	51.09
TraesCS5B01G403600.1	Wheat	endoplasmic reticulum, extracellular	53.26	50.0
TraesCS5D01G408100.1	Wheat	endoplasmic reticulum, extracellular	52.17	48.98
CDX93153	Canola	extracellular	55.43	48.11
CDX89647	Canola	extracellular	55.43	48.11
TraesCS5A01G398700.1	Wheat	endoplasmic reticulum, extracellular	51.09	47.96
CDY50148	Canola	extracellular	50.0	47.92
CDY22975	Canola	extracellular	50.0	47.42
CDY54472	Canola	extracellular	54.35	45.87
CDY52417	Canola	extracellular	53.26	45.37
CDY27104	Canola	extracellular	46.74	40.95
CDY46336	Canola	extracellular	45.65	40.38
CDY18069	Canola	extracellular	45.65	40.38
CDY71845	Canola	extracellular	40.22	36.63
CDY60168	Canola	extracellular	43.48	33.33
CDY00909	Canola	extracellular	42.39	32.77
CDX91001	Canola	extracellular	35.87	31.13
CDX85557	Canola	extracellular	35.87	31.13
CDX70601	Canola	extracellular	35.87	31.13
CDY41324	Canola	cytosol	36.96	30.63
CDY22221	Canola	extracellular	42.39	30.47
CDX78620	Canola	cytosol	33.7	22.14

Protein Annotations

EnsemblPlants:CDX80223	EnsemblPlantsGene:GSBRNA2T00133173001	InterPro:GASA	PANTHER:PTHR23201	PANTHER:PTHR23201:SF10	PFAM:PF02704
ProteinID:CDX80223	ProteinID:CDX80223.1	SEG:seg	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0004EE5DB4
MapMan:11.10.2.1.1	:	:	:	:	:

Description

BnaC09g35190D

Coordinates

chrLK031820:-:614171..614944

Molecular Weight (calculated)

10185.3 Da

IEP (calculated)

8.428

GRAVY (calculated)

-0.424

Length

92 amino acids

Sequence
(BLAST)

1: MKMKLAVVQF FIISLLLSSS LFMLSNADSS PCNGKCNARC SKAGRQDRCL KYCNICCEKC DDHCVPSGTY GNKDECPCYR DTKNSNGKPK CP

Best Arabidopsis Sequence Match ( AT5G59845.1 )
(BLAST)

1: MKFPAVKVLI ISLLITSSLF ILSTADSSPC GGKCNVRCSK AGRQDRCLKY CNICCEKCNY CVPSGTYGNK DECPCYRDMK NSKGTSKCP

Arabidopsis Description

GASA10Gibberellin-regulated protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFM2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.