Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY50148 | Canola | extracellular | 79.38 | 80.21 |
| GSMUA_Achr6P07810_001 | Banana | cytosol | 30.93 | 63.83 |
| Solyc08g005620.2.1 | Tomato | extracellular | 48.45 | 52.81 |
| GSMUA_Achr5P16080_001 | Banana | extracellular | 42.27 | 52.56 |
| CDY31590 | Canola | extracellular | 49.48 | 52.17 |
| CDY31591 | Canola | extracellular | 49.48 | 52.17 |
| PGSC0003DMT400047535 | Potato | extracellular | 47.42 | 51.69 |
| CDX71072 | Canola | extracellular | 48.45 | 51.65 |
| CDY09248 | Canola | extracellular | 46.39 | 50.56 |
| CDX88727 | Canola | extracellular | 47.42 | 50.55 |
| CDX80223 | Canola | extracellular | 47.42 | 50.0 |
| GSMUA_Achr6P11160_001 | Banana | extracellular | 46.39 | 49.45 |
| GSMUA_Achr10P... | Banana | extracellular | 46.39 | 49.45 |
| TraesCS5A01G398600.1 | Wheat | endoplasmic reticulum, extracellular | 48.45 | 48.96 |
| CDX80222 | Canola | extracellular | 46.39 | 48.91 |
| CDY72009 | Canola | extracellular | 43.3 | 47.73 |
| CDX89647 | Canola | extracellular | 51.55 | 47.17 |
| CDX93153 | Canola | extracellular | 51.55 | 47.17 |
| Zm00001d013222_P001 | Maize | extracellular | 46.39 | 46.88 |
| TraesCS5D01G408000.1 | Wheat | extracellular | 45.36 | 46.81 |
| TraesCS5A01G398500.1 | Wheat | extracellular | 44.33 | 45.74 |
| TraesCS5B01G403500.1 | Wheat | extracellular | 44.33 | 45.74 |
| GSMUA_Achr10P... | Banana | extracellular | 43.3 | 45.65 |
| CDY20958 | Canola | extracellular | 41.24 | 45.45 |
| CDY20617 | Canola | extracellular | 41.24 | 45.45 |
| CDY52417 | Canola | extracellular | 50.52 | 45.37 |
| EER90847 | Sorghum | extracellular | 43.3 | 45.16 |
| Os03t0760800-01 | Rice | extracellular | 43.3 | 45.16 |
| GSMUA_Achr6P02260_001 | Banana | extracellular | 42.27 | 45.05 |
| TraesCS5A01G398700.1 | Wheat | endoplasmic reticulum, extracellular | 45.36 | 44.9 |
| CDX93402 | Canola | endoplasmic reticulum, extracellular | 43.3 | 44.68 |
| CDY54472 | Canola | extracellular | 49.48 | 44.04 |
| TraesCS5D01G408100.1 | Wheat | endoplasmic reticulum, extracellular | 44.33 | 43.88 |
| TraesCS5B01G403600.1 | Wheat | endoplasmic reticulum, extracellular | 43.3 | 42.86 |
| VIT_07s0129g00580.t01 | Wine grape | extracellular | 51.55 | 39.37 |
| CDY14668 | Canola | cytosol | 29.9 | 39.19 |
| CDY18069 | Canola | extracellular | 35.05 | 32.69 |
| CDY46336 | Canola | extracellular | 35.05 | 32.69 |
| CDY71845 | Canola | extracellular | 32.99 | 31.68 |
| CDX70601 | Canola | extracellular | 34.02 | 31.13 |
| CDX85557 | Canola | extracellular | 34.02 | 31.13 |
| CDX91001 | Canola | extracellular | 34.02 | 31.13 |
| CDY27104 | Canola | extracellular | 31.96 | 29.52 |
| CDY41324 | Canola | cytosol | 30.93 | 27.03 |
| CDY00909 | Canola | extracellular | 32.99 | 26.89 |
| CDY60168 | Canola | extracellular | 32.99 | 26.67 |
| CDY22221 | Canola | extracellular | 35.05 | 26.56 |
| CDX78620 | Canola | cytosol | 31.96 | 22.14 |
Protein Annotations
| EnsemblPlants:CDY22975 | EnsemblPlantsGene:GSBRNA2T00021386001 | InterPro:GASA | PANTHER:PTHR23201 | PANTHER:PTHR23201:SF10 | PFAM:PF02704 |
| ProteinID:CDY22975 | ProteinID:CDY22975.1 | SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0004EEC0A2 |
| UniProt:A0A078G982 | MapMan:11.10.2.1.1 | : | : | : | : |
Description
BnaC03g40940DBnaC03g40940D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G982]
Coordinates
chrLK032138:+:311732..313038
Molecular Weight (calculated)
10672.4 Da
IEP (calculated)
9.356
GRAVY (calculated)
0.093
Length
97 amino acids
Sequence
(BLAST)
(BLAST)
1: MNCKESVTFF FFLALLILPF VLLPATGAPG RVGGMGVYCV SRCRGRCSKA GFRDRCIKYC GICCRQCKCV PSGTFGNKHQ CPCYRDMLSS KGKPKCP
001: MKIIVSILVL ASLLLISSSL ASATISDAFG SGAVAPAPQS KDGPALEKWC GQKCEGRCKE AGMKDRCLKY CGICCKDCQC VPSGTYGNKH ECACYRDKLS
101: SKGTPKCP
101: SKGTPKCP
Arabidopsis Description
GASA7Gibberellin-regulated protein 7 [Source:UniProtKB/Swiss-Prot;Acc:O82328]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.